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Protein Overview: gi|42571799

General Information:
Name(s) found: gi|42571799 [NCBI NR]
Description(s) found:
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  • gi|42571799|ref|NP_973990.1| GATB (GLU-ADT SUBUNIT B); carbon-nitrogen ligase, with glutamine as amido-N-donor / glutaminyl-tRNA synthase (glutamine-hydrolyzing)/ ligase [Arabidopsis thaliana] [NCBI NR]
  • glutamyl-tRNA(Gln) amidotransferase B family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Glutamyl-tRNA(Gln) amidotransferase B family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: GATB | GATB (GLU-ADT SUBUNIT B); glutaminyl-tRNA synthase (glutamine-hydrolyzing) | chr1:17943853-17945743 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • GATB (GLU-ADT SUBUNIT B); carbon-nitrogen ligase, with glutamine as amido-N-donor / glutamyl-tRNA(Gln) amidotransferase/ ligase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: GATB | GLU-ADT subunit B | chr1:17940185-17942075 FORWARD LENGTH=475 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Isoform 2 of Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GATB [ARATH-contam.fasta]
  • Isoform of Q9FV81, Isoform 2 of Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GATB [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 475 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translation [IEA]
    Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor [IEA]
    ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTLLRTIQ LNQFSLLGTS LLRRRRSNNF SVRSCGSQTT TTHEAKQSSP TRVAPKNHKS  60
   61 NQLDEILRDY EAVIGIETHV QLSTLTKAFC SCSNNYGSYP NTSICPVCMG LPGALPVLNS 120
  121 KVVEFGVRLG LALNCDLSLK SKFDRKQYFY PDLPKGYQIS QFDIPIASGG YVDVDIPLEF 180
  181 GGGHRRFGIT RVHMEEDAGK LLHSDTGDYS QVDLNRAGVP LLEIVSEPDM RSGIEAAEYA 240
  241 CEMQRIARYL GVSNGNMQEG SLRCDVNISI RPIGQAEFGT KVEIKNLNAF SAISRAIDFE 300
  301 ISRQALLYNQ GKADQIVTET RLWEEGAQKT VTMRKKEGLA DYRYFPEPDL PEVILTQEYV 360
  361 DSIRASLPEL PEAKRRRYEA MGLGMQDVLF LANDVSVAEY FDAVIGKGAE VKLAANWIMS 420
  421 DIAAYLKNEK LSINDIKLTP QELAELIAAI KDGTISGKIG KEVGSIQSTN SSSFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..475] PSI-BLAST 173.0 No description for 2df4B was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle