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Protein Overview: TAF1_ARATH

General Information:
Name(s) found: TAF1_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Transcription initiation factor TFIID subunit 1 OS=Arabidopsis thaliana GN=TAF1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1919 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA mediated transformation [IMP]
    Molecular Function: DNA binding [ISS]
    histone acetyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESNGKGSH NETSSDDDDE YEDNSRGFNL GFIFGNVDNS GDLDADYLDE DAKEHLSALA  60
   61 DKLGSSLPDI NLLAKSERTA SDPAEQDYDR KAEDAVDYED IDEEYDGPEV QVVSEEDHLL 120
  121 PKKEYFSTAV ALGSLKSRAS VFDDEDYDEE EEQEEEQAPV EKSLETEKRE PVVLKEDKAL 180
  181 EYEEEASILD KEDHMDTEDV QEEEVDELLE GTLDDKGATP LPTLYVEDGM VILQFSEIFA 240
  241 IHEPPQKRDR RENRYVTCRD KYKSMDISEL VEDDEEVLLK SHGRIDTHVE QADLIQLDVP 300
  301 FPIREGLQLV KASTIGGITP ESREFTKLGR DSCIMGELLK QDFIDDNSSL CQSQLSMQVF 360
  361 PLDQHEWERR IIWEHSPEIS GNSGEIFEPG LEPEGMLVKG TNSETEQESL NVVNSRVQVQ 420
  421 ADNNMFVPFS ANLLESFGSR GSQSTNESTN KSRHHPQLLR LESQWDENHL SGNDEAGVKK 480
  481 IKRLEKDALG RFSRLVLRER DLGDEAWLDS IIWDSEKELS RSKLIFDLQD EQMVFEIFDN 540
  541 EESKNLQLHA GAMIVSRSSK SKDETFQEGC ESNSGWQFNL SNDKFYMNGK SSQQLQANTN 600
  601 KSSVHSLRVF HSVPAIKLQT MKSKLSNKDI ANFHRPKALW YPHDNELAIK QQGKLPTRGS 660
  661 MKIIVKSLGG KGSKLHVGIE ESVSSLRAKA SRKLDFKETE AVKMFYKGKE LDDEKSLAAQ 720
  721 NVQPNSLVHL IRTKVHLWPW AQKLPGENKS LRPPGAFKKK SDLSTKDGHV FLMEYCEERP 780
  781 LMLSNAGMGA NLCTYYQKSS PEDQRGNLLR NQSDTLGNVM ILEPGDKSPF LGEIHAGCSQ 840
  841 SSVETNMYKA PIFPQRLQST DYLLVRSPKG KLSLRRIDKI VVVGQQEPRM EVMSPGSKNL 900
  901 QTYLVNRMLV YVYREFFKRG GGEHPIAADE LSFLFSNLTD AIIKKNMKII ACWKRDKNGQ 960
  961 SYWTKKDSLL EPPESELKKL VAPEHVCSYE SMLAGLYRLK HLGITRFTLP ASISNALAQL1020
 1021 PDEAIALAAA SHIERELQIT PWNLSSNFVA CTNQDRANIE RLEITGVGDP SGRGLGFSYV1080
 1081 RAAPKAPAAA GHMKKKAAAG RGAPTVTGTD ADLRRLSMEA AREVLIKFNV PDEIIAKQTR1140
 1141 WHRIAMIRKL SSEQAASGVK VDPTTIGKYA RGQRMSFLQM QQQAREKCQE IWDRQLLSLS1200
 1201 AFDGDENESE NEANSDLDSF AGDLENLLDA EEGGEGEESN ISKNDKLDGV KGLKMRRRPS1260
 1261 QVETDEEIED EATEYAELCR LLMQDEDQKK KKKKMKGVGE GMGSYPPPRP NIALQSGEPV1320
 1321 RKANAMDKKP IAIQPDASFL VNESTIKDNR NVDSIIKTPK GKQVKENSNS LGQLKKVKIL1380
 1381 NENLKVFKEK KSARENFVCG ACGQHGHMRT NKHCPRYREN TESQPEGIDM DKSAGKPSSS1440
 1441 EPSGLPKLKP IKNSKAAPKS AMKTSVDEAL KGDKLSSKTG GLPLKFRYGI PAGDLSDKPV1500
 1501 SEAPGSSEQA VVSDIDTGIK STSKISKLKI SSKAKPKESK GESERRSHSL MPTFSRERGE1560
 1561 SESHKPSVSG QPLSSTERNQ AASSRHTISI PRPSLSMDTD QAESRRPHLV IRPPTEREQP1620
 1621 QKKLVIKRSK EMNDHDMSSL EESPRFESRK TKRMAELAGF QRQQSFRLSE NSLERRPKED1680
 1681 RVWWEEEEIS TGRHREVRAR RDYDDMSVSE EPNEIAEIRR YEEVIRSERE EEERQKAKKK1740
 1741 KKKKKLQPEI VEGYLEDYPP RKNDRRLSER GRNVRSRYVS DFERDGAEYA PQPKRRKKGE1800
 1801 VGLANILERI VDTLRLKEEV SRLFLKPVSK KEAPDYLDIV ENPMDLSTIR DKVRKIEYRN1860
 1861 REQFRHDVWQ IKYNAHLYND GRNPGIPPLA DQLLEICDYL LDDYEDQLKE AEKGIDPND

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] PSI-BLAST 6.522879 TAF(II)230 TBP-binding fragment
    2 View Details [83..299] deduced N/A No confident structure predictions are available.
    3 View Details [300..419] deduced N/A No confident structure predictions are available.
    4 View Details [420..577] deduced N/A No confident structure predictions are available.
    5 View Details [578..669] deduced N/A No confident structure predictions are available.
    6 View Details [670..748] PSI-BLAST 20.39794 No description for 2ojrA was found.
    7 View Details [749..1022] PSI-BLAST 60.0 No description for 2oanA was found.
    8 View Details [1023..1162] deduced N/A No confident structure predictions are available.
    9 View Details [1163..1357] deduced N/A No confident structure predictions are available.
    10 View Details [1358..1523] deduced N/A No confident structure predictions are available.
    11 View Details [1524..1592] deduced N/A No confident structure predictions are available.
    12 View Details [1593..1919] PSI-BLAST 27.39794 TAFII250 double bromodomain module


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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