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Protein Overview: SCL14_ARATH

General Information:
Name(s) found: SCL14_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 769 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytosol [IDA]
    Biological Process: positive regulation of gene-specific transcription [IMP]
    response to xenobiotic stimulus [IMP]
    regulation of transcription [TAS]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSYPDGFPG SMDELDFNKD FDLPPSSNQT LGLANGFYLD DLDFSSLDPP EAYPSQNNNN  60
   61 NNINNKAVAG DLLSSSSDDA DFSDSVLKYI SQVLMEEDME EKPCMFHDAL ALQAAEKSLY 120
  121 EALGEKYPSS SSASSVDHPE RLASDSPDGS CSGGAFSDYA STTTTTSSDS HWSVDGLENR 180
  181 PSWLHTPMPS NFVFQSTSRS NSVTGGGGGG NSAVYGSGFG DDLVSNMFKD DELAMQFKKG 240
  241 VEEASKFLPK SSQLFIDVDS YIPMNSGSKE NGSEVFVKTE KKDETEHHHH HSYAPPPNRL 300
  301 TGKKSHWRDE DEDFVEERSN KQSAVYVEES ELSEMFDKIL VCGPGKPVCI LNQNFPTESA 360
  361 KVVTAQSNGA KIRGKKSTST SHSNDSKKET ADLRTLLVLC AQAVSVDDRR TANEMLRQIR 420
  421 EHSSPLGNGS ERLAHYFANS LEARLAGTGT QIYTALSSKK TSAADMLKAY QTYMSVCPFK 480
  481 KAAIIFANHS MMRFTANANT IHIIDFGISY GFQWPALIHR LSLSRPGGSP KLRITGIELP 540
  541 QRGFRPAEGV QETGHRLARY CQRHNVPFEY NAIAQKWETI QVEDLKLRQG EYVVVNSLFR 600
  601 FRNLLDETVL VNSPRDAVLK LIRKINPNVF IPAILSGNYN APFFVTRFRE ALFHYSAVFD 660
  661 MCDSKLARED EMRLMYEKEF YGREIVNVVA CEGTERVERP ETYKQWQARL IRAGFRQLPL 720
  721 EKELMQNLKL KIENGYDKNF DVDQNGNWLL QGWKGRIVYA SSLWVPSSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..219] deduced N/A No confident structure predictions are available.
    2 View Details [220..373] deduced N/A No confident structure predictions are available.
    3 View Details [374..496] MSA 5.116988 View MSA. No confident structure predictions are available.
    4 View Details [497..604] deduced N/A Confident ab initio structure predictions are available.
    5 View Details [605..769] MSA 4.124959 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle