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Protein Overview: LHY_ARATH

General Information:
Name(s) found: LHY_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 645 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to gibberellin stimulus [IEP]
    response to abscisic acid stimulus [IEP]
    response to salt stress [IEP]
    long-day photoperiodism, flowering [IGI]
    response to jasmonic acid stimulus [IEP]
    response to cadmium ion [IEP]
    response to salicylic acid stimulus [IEP]
    regulation of transcription [TAS]
    response to ethylene stimulus [IEP]
    response to auxin stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTNTSGEEL LAKARKPYTI TKQRERWTED EHERFLEALR LYGRAWQRIE EHIGTKTAVQ  60
   61 IRSHAQKFFT KLEKEAEVKG IPVCQALDIE IPPPRPKRKP NTPYPRKPGN NGTSSSQVSS 120
  121 AKDAKLVSSA SSSQLNQAFL DLEKMPFSEK TSTGKENQDE NCSGVSTVNK YPLPTKQVSG 180
  181 DIETSKTSTV DNAVQDVPKK NKDKDGNDGT TVHSMQNYPW HFHADIVNGN IAKCPQNHPS 240
  241 GMVSQDFMFH PMREETHGHA NLQATTASAT TTASHQAFPA CHSQDDYRSF LQISSTFSNL 300
  301 IMSTLLQNPA AHAAATFAAS VWPYASVGNS GDSSTPMSSS PPSITAIAAA TVAAATAWWA 360
  361 SHGLLPVCAP APITCVPFST VAVPTPAMTE MDTVENTQPF EKQNTALQDQ NLASKSPASS 420
  421 SDDSDETGVT KLNADSKTND DKIEEVVVTA AVHDSNTAQK KNLVDRSSCG SNTPSGSDAE 480
  481 TDALDKMEKD KEDVKETDEN QPDVIELNNR KIKMRDNNSN NNATTDSWKE VSEEGRIAFQ 540
  541 ALFARERLPQ SFSPPQVAEN VNRKQSDTSM PLAPNFKSQD SCAADQEGVV MIGVGTCKSL 600
  601 KTRQTGFKPY KRCSMEVKES QVGNINNQSD EKVCKRLRLE GEAST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 11.69897 No description for 2v1dB was found.
    2 View Details [118..352] deduced N/A No confident structure predictions are available.
    3 View Details [353..519] MSA 3.185995 View MSA. No confident structure predictions are available.
    4 View Details [520..645] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.45

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle