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Protein Overview: gi|109946403, gi...

General Information:
Name(s) found: gi|18394775 [NCBI NR]
gi|109946403 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|18394775|ref|NP_564095.1| binding / catalytic/ coenzyme binding [Arabidopsis thaliana] [NCBI NR]
  • gi|109946403|gb|ABG48380.1| At1g19690 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: metabolic process [IEA]
    cellular metabolic process [IEA]
    Molecular Function: coenzyme binding [IEA]
    catalytic activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFQLPSLS PEIPFRFTPT PLKFSNRRRI NFFRPLSATD DSRSGAPDPE SPNQMFILGM  60
   61 GFVGGFFAQQ LKESDWVVSG TCRSDSKKKE WEKRGINLHP FSADSPEWSL LDSVKDYTHL 120
  121 LISIPPLADI GDPMLRNVEL VRDKLSSGNL RWLCYLSSTS VYGDCGGAWV NENHLPNPKT 180
  181 QSAKVRLAAE QGWLSLGRDL GVSTQILRLG GIYGPGRSAI DTLLKQERLS EGQKRRASRK 240
  241 FTSRVHVEDI CQVLKAATEK PASGEIYNIV DDDPAAREEV FEYALELIEK RWPGNITTKP 300
  301 FPFLYESREE SSLRGEKRVC NERMKDKLGV KLLYPSYKSG LQSIVENMDN RF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..352] PSI-BLAST 72.0 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.03099072397093 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.442294542097958 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle