YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|18424850, gi|...

General Information:
Name(s) found: gi|18424850 [NCBI NR]
gi|107738052 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|18424850|ref|NP_568992.1| ribosomal protein L17 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|107738052|gb|ABF83622.1| At5g64650 [Arabidopsis thaliana] [NCBI NR]
  • ribosomal protein L17 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ribosomal protein L17 family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ribosomal protein L17 family protein | chr5:25856768-25858001 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At5g64650 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L17 family protein | chr5:25839542-25840775 REVERSE LENGTH=160 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g64650 OS=Arabidopsis thaliana GN=At5g64650 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: ribosome [IEA][ISS]
    intracellular [IEA]
    Biological Process: translation [IEA]
    Molecular Function: structural constituent of ribosome [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKFRKLGRP AGHRMSMLRT MVSQLVQHER IETTVTKAKE VRRLADNMIQ LGKEGSLAAA  60
   61 RRAAGFVRGD DVLHKIFTEL AHRYKDRAGG YTRMLRTRIR VGDAAPMAYI EFIDRENELR 120
  121 QSKPATPQPP PRVPLDPWAR SRLTRQYAPP KEEKTSDSDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 45.30103 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.91574154879999 bayes_pls_golite062009
  • structural molecule activity
    		•  9.33953790706737 bayes_pls_golite062009
  • binding
    		•  0.790046242885262 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle