YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: NEN2_ARATH

General Information:
Name(s) found: NEN2_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • Protein NEN2 OS=Arabidopsis thaliana GN=NEN2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 487 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA][ISS]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA]
    exonuclease activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTMVGLTPA EDRSEIAFFD VETTIPFRVG QGYAILEFGS ILVCPKKLVE LKNYSVLVRP  60
   61 ANLNLITPRS VKCNGIKRED VESALTFADI ADTVYDILHG RIWAGHNILK FDCPRIREAF 120
  121 AEIGRDPPEP KGTIDSLALL TQRFGRRAGD MKMATLATYF GLGNQTHRSL DDVRMNFEVL 180
  181 KYCATVLFLE SSLPDELIEN SVTTTTPETS SRRRRTIKKS PLQSPTDQQT GENMTTIPIL 240
  241 SFVSSAEAQT DPFDMSTLRN EIAPEVLQSD VPMEEEQNQQ SETVASEGTG DQEGFMELDK 300
  301 ISVSSIRATH VPLYDGSQTM KLQLFLGDRP LQLHCPRLKV RFGINGKFMD KAGRRRLNFV 360
  361 IDLYPSLCNV LQECDSAAQT ISVDSGSGSD WNPLVIPMKG FLNCPTARIH IPTELNGDID 420
  421 RYAAEIHQKE FSGATATQKL ISSNPKAEEI ESLLNPRTVL DAFLSLEPYD YQQRAGIRLV 480
  481 ARKLVIH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..385] PSI-BLAST 36.30103 Exonuclease I
    2 View Details [386..487] FFAS03 0.961 Solution structure of Ubiquitin-like domain in splicing factor AAL91182

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.0155013961187369 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle