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Protein Overview: gi|42573740

General Information:
Name(s) found: gi|42573740 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|42573740|ref|NP_974966.1| SEN2 (splicing endonuclease 2); nuclease/ tRNA-intron endonuclease [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 255 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLNSMAPRW KWKGAEAKAL AEPISKSVSE LQLSLAETES SGTLSSCNVL LAVEPEQAEL  60
   61 LDRCCFGRLV LSAEKIKKWI QLSFEEAFFL HYNLKCIKIS LQGRCLENEV DTWLYMKSKR 120
  121 PNFPMFFKAY SHLRSKNWVL RSGLQYGVDF VAYRHHPSLV HSEYSVLVQS GDSDRLRVWS 180
  181 DIHCAVRLSG SVAKTLLTLY VNGNFKGEDV NLLVCLENFT VEEQTISRWS PELSREDQST 240
  241 NSKQHVPNVS NLNTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..255] PSI-BLAST 38.045757 tRNA splicing endonuclease, C-terminal domain; tRNA splicing endonuclease EdnA, N-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle