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Protein Overview: FH16_ARATH

General Information:
Name(s) found: FH16_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30682092|ref|NP_196394.2| formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|160013969|sp|Q9FF15.2|FH16_ARATH RecName: Full=Formin-like protein 16; Short=AtFH16 [NCBI NR]
  • Formin-like protein 16 OS=Arabidopsis thaliana GN=FH16 PE=3 SV=2 [Swiss-Prot]
  • formin homology 2 domain-containing protein / FH2 domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Formin homology 2 domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | formin homology 2 domain-containing protein / FH2 domain-containing protein | chr5:2474817-2479023 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • actin binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Actin-binding FH2 protein | chr5:2474816-2479022 FORWARD LENGTH=722 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Formin-like protein 16 OS=Arabidopsis thaliana GN=FH16 PE=2 SV=2 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 722 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: NONE FOUND
    Molecular Function: actin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPVEITGAD AVVTPPMRGR VPLPPPPPPP MRRSAPSPPP MSGRVPPPPP PPPMFDPKGA  60
   61 GRVICCLRPG QNKSSLKRFQ CGKLTNAWEE LQRHGEAQTA PEFDLSEIEA LFSAAVQNQA 120
  121 DKSGSRREAF EANPDKLQLI SGADALVPLP PPPPPMPRRS PPPPPPRFDA FDHKGARMVC 180
  181 GFRCPVTKRS SLKPLHWVKI TRALQGSLWD ELQIQYGESQ TAIELDVPEI ETLFSVGAKP 240
  241 RPKPKPEKVP LIDLKRANNT IVNLKILKMP LPDMMAAVMA MDESVLDVDQ IENLIQLCPT 300
  301 KEEMELLKNY TGDKATLGKS EQCLLELMKV PRFEAKLRVL SFKIPFGTKI TKFRKMLNVV 360
  361 NSACEEVRSS QMLKEIMKII LFLGNTLNQG TARGSAVGFR LDSLLILSET RADNNKMTLM 420
  421 HYLCKVLASK AADLLDFHKD LQSLESTLEI NLKSLAEEIH AITKGLEKLK QELTASETDG 480
  481 PVSQVFRKLL KDFISSAETQ VATVSTLYSS ARINADALAH YFGEDPNHYP FEKVSATLLS 540
  541 FIRLFKKAHQ ENVKQEDLEK KKAATEDVFG GPDHNIDSDT SLDDSEAKSP SRIRPPPSIP 600
  601 RPPSRPRYAC CRIPAVNPPP RLVCGPYPLP RLVRVGSPSP PPPSMSGGAP PPPPPPPMLV 660
  661 ASRTAPPPHL SHVRSIPFQT RLVMGTSPLP LLVREGAPPP TLPSMSGGAP PPPPPLPMLR 720
  721 YQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..175] FFAS03 1.19 Bni1p Formin Homology 2 Domain complexed with ATP-actin
    2 View Details [176..639] PSI-BLAST 115.0 No description for 2j1dG was found.
    3 View Details [640..722] FFAS03 1.71 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle