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Protein Overview: gi|145651788, gi...

General Information:
Name(s) found: gi|42568162 [NCBI NR]
gi|145651788 [NCBI NR]
Description(s) found:
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  • gi|42568162|ref|NP_198550.3| zinc finger (ZPR1-type) family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|145651788|gb|ABP88119.1| At5g37340 [Arabidopsis thaliana] [NCBI NR]
  • zinc finger (ZPR1-type) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Zinc finger (ZPR1-type) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | zinc finger (ZPR1-type) family protein | chr5:14804718-14809603 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • protein binding / zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | ZPR1 zinc-finger domain protein | chr5:14787488-14792373 REVERSE LENGTH=493 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At5g37340 OS=Arabidopsis thaliana GN=At5g37340 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of F4K746, At5g37340 OS=Arabidopsis thaliana GN=At5g37340 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 493 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNGNDQQID VGSVVEAVSA DHSFGAPLYV VESMCMRCGE NGTTRFLLTL IPHFRKVLIS  60
   61 AFECPHCGER NNEVQFAGEI QPRGCSYHLE VSAGDVKTFD RQVVKSESAT IKIPELDFEI 120
  121 PPEAQSGSLS TVEGILSRAA DELSALQEER RKVDPKTAEA IDQFLSKLRA CAKAETSFTF 180
  181 ILDDPAGNSF IENPHAPSLD PSLTIKFYER TPEQQATLGY LTNPSQTGQS ERSLGTPSTQ 240
  241 TTALPHGTIG ATAGHRAIAQ SNSTDISDNL FRYSAPEEVM TFPSTCGACT KLCETRMFVT 300
  301 KIPYFQEVIV MASTCDDCGY RNSELKPGGA IPEKGKKITL SVKNITDLSR DVIKSDTAGV 360
  361 KIPELDLELA GGTLGGMVTT VEGLVTQIRE SLARVHGFTF GDSLEQSKIN KWKEFGSRLT 420
  421 KLLSLEQEWT LILDDELANS FISPVTDDIK DDHQLTFEEY ERSWEQNEEL GLNDIDTSSA 480
  481 DAAYESTEPT KLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..493] PSI-BLAST 151.0 No description for 2qkdA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle