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Protein Overview: XGD1_ARATH

General Information:
Name(s) found: XGD1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|42568129|ref|NP_198314.2| XGD1 (XYLOGALACTURONAN DEFICIENT 1); UDP-xylosyltransferase/ catalytic [Arabidopsis thaliana] [NCBI NR]
  • Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2 [Swiss-Prot]
  • exostosin family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Exostosin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: XGD1 | XGD1 (XYLOGALACTURONAN DEFICIENT 1); catalytic | chr5:12575669-12579070 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • catalytic [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: XGD1 | xylogalacturonan deficient 1 | chr5:12558439-12561840 FORWARD LENGTH=500 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 500 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    Golgi apparatus [IDA]
    Biological Process: pectin biosynthetic process [IMP]
    xylogalacturonan metabolic process [IMP]
    Molecular Function: catalytic activity [ISS]
    UDP-xylosyltransferase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPRSRRCS LSLLTLFSIT LILISVSLFV STKPANKPFL DYRNQFSISI SISSPLEQNT  60
   61 TNTSFVSASP PLSPLGQSNT TNTILASSSS SSSFSDHQNQ NKSPSPTSKK IVIRKRSGLD 120
  121 KIESDLAKAR AAIKKAASTQ NYVSSLYKNP AAFHQSHTEM MNRFKVWTYT EGEVPLFHDG 180
  181 PVNDIYGIEG QFMDEMCVDG PKSRSRFRAD RPENAHVFFI PFSVAKVIHF VYKPITSVEG 240
  241 FSRARLHRLI EDYVDVVATK HPYWNRSQGG DHFMVSCHDW APDVIDGNPK LFEKFIRGLC 300
  301 NANTSEGFRP NVDVSIPEIY LPKGKLGPSF LGKSPRVRSI LAFFAGRSHG EIRKILFQHW 360
  361 KEMDNEVQVY DRLPPGKDYT KTMGMSKFCL CPSGWEVASP REVEAIYAGC VPVIISDNYS 420
  421 LPFSDVLNWD SFSIQIPVSR IKEIKTILQS VSLVRYLKMY KRVLEVKQHF VLNRPAKPYD 480
  481 VMHMMLHSIW LRRLNLRLGT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..286] MSA 2.117969 View MSA. No confident structure predictions are available.
    3 View Details [287..500] FFAS03 1.05 No description for 2nzwA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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