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Protein Overview: GAT12_ARATH

General Information:
Name(s) found: GAT12_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 331 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: circadian rhythm [IEP]
    response to light stimulus [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDEAHEFFH TSDFAVDDLL VDFSNDDDEE NDVVADSTTT TTITDSSNFS AADLPSFHGD  60
   61 VQDGTSFSGD LCIPSDDLAD ELEWLSNIVD ESLSPEDVHK LELISGFKSR PDPKSDTGSP 120
  121 ENPNSSSPIF TTDVSVPAKA RSKRSRAAAC NWASRGLLKE TFYDSPFTGE TILSSQQHLS 180
  181 PPTSPPLLMA PLGKKQAVDG GHRRKKDVSS PESGGAEERR CLHCATDKTP QWRTGPMGPK 240
  241 TLCNACGVRY KSGRLVPEYR PAASPTFVLA KHSNSHRKVM ELRRQKEMSR AHHEFIHHHH 300
  301 GTDTAMIFDV SSDGDDYLIH HNVGPDFRQL I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] MSA 3.232996 View MSA. No confident structure predictions are available.
    2 View Details [209..331] PSI-BLAST 15.0 Erythroid transcription factor GATA-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.270879137859077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle