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Protein Overview: gi|30688274, gi|...

General Information:
Name(s) found: gi|30688274 [NCBI NR]
gi|18420426 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|30688274|ref|NP_851052.1| ubiquitin-specific protease 8, putative (UBP8) [Arabidopsis thaliana] [NCBI NR]
  • gi|18420426|ref|NP_568411.1| ubiquitin-specific protease 8, putative (UBP8) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 622 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGGTVFRFG RSNSLSFLGK AGEAGTLGLT GLQNLGNTCF MNSSLQCLAH TPKLVDFFLG  60
   61 EYSKEINLDN PLGMKGEIAL AFGDLLRSLW APGASTVAPR TFKAKLARFA PQFSGFNQHD 120
  121 SQELLAFLLD GLHEDLNRVK NKPYVEAKDG DGRPDAEVAD EYWRNHVARN DSIIVDVCQG 180
  181 QYKSTLVCPI CKKVSVMFDP FMYLSLPLPC TSMRTMDLTV MSADGSSLPI PLTVNVPKFG 240
  241 KFEDLHKALV TACSLPEEET LLVTEVYNNR IIRFLEEPTD SLTLIRDGDK LVVYRLKKDA 300
  301 NNSPLIVYMH QKLEEQFISG KSSPTWKAFG IPLVSRLCDV ENGSDVENLY LKLLSSFKMP 360
  361 TEFFTENLEN PTEEEATDKT DTDGTTSVED TNSTDVKETT ESLPDPVLRL YLTDDRGNSI 420
  421 EAEMLKEKPV NKSKRLNVLA RWPVKELDVY DTCLLSSLPE VSKSGTKRPQ ESVSLFKCLE 480
  481 AFLTEEPLGP DDMWYCPGCK EHRQAIKKLD LWRLPEILVI HLKRFSYSRF MKNKLEAYVD 540
  541 FPLDNLDLSS YISYKNGQTT YRYMLYAISN HYGSMGGGHY TAYVHHGGDR WYDFDDSHVH 600
  601 QISQEKIKTS AAYVLFYKRL VD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] PSI-BLAST 51.69897 No description for 2ibiA was found.
    2 View Details [272..622] PSI-BLAST 28.154902 Crystal structure of HAUSP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle