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Protein Overview: gi|8071650, gi|3...

General Information:
Name(s) found: gi|8071650 [NCBI NR]
gi|30687943 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana] [NCBI NR]
  • gi|30687943|ref|NP_851046.1| NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1165 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAPSSNGVS PNPVEGERRN INSELWHACA GPLISLPPAG SLVVYFPQGH SEQVAASMQK  60
   61 QTDFIPSYPN LPSKLICMLH NVTLNADPET DEVYAQMTLQ PVNKYDRDAL LASDMGLKLN 120
  121 RQPNEFFCKT LTASDTSTHG GFSVPRRAAE KIFPALDFSM QPPCQELVAK DIHDNTWTFR 180
  181 HIYRGQPKRH LLTTGWSVFV STKRLFAGDS VLFIRDGKAQ LLLGIRRANR QQPALSSSVI 240
  241 SSDSMHIGVL AAAAHANANN SPFTIFYNPR WAAPAEFVVP LAKYTKAMYA QVSLGMRFRM 300
  301 IFETEECGVR RYMGTVTGIS DLDPVRWKNS QWRNLQIGWD ESAAGDRPSR VSVWDIEPVL 360
  361 TPFYICPPPF FRPRFSGQPG MPDDETDMES ALKRAMPWLD NSLEMKDPSS TIFPGLSLVQ 420
  421 WMNMQQQNGQ LPSAAAQPGF FPSMLSPTAA LHNNLGGTDD PSKLLSFQTP HGGISSSNLQ 480
  481 FNKQNQQAPM SQLPQPPTTL SQQQQLQQLL HSSLNHQQQQ SQSQQQQQQQ QLLQQQQQLQ 540
  541 SQQHSNNNQS QSQQQQQLLQ QQQQQQLQQQ HQQPLQQQTQ QQQLRTQPLQ SHSHPQPQQL 600
  601 QQHKLQQLQV PQNQLYNGQQ AAQQHQSQQA STHHLQPQLV SGSMASSVIT PPSSSLNQSF 660
  661 QQQQQQSKQL QQAHHHLGAS TSQSSVIETS KSSSNLMSAP PQETQFSRQV EQQQPPGLNG 720
  721 QNQQTLLQQK AHQAQAQQIF QQSLLEQPHI QFQLLQRLQQ QQQQQFLSPQ SQLPHHQLQS 780
  781 QQLQQLPTLS QGHQFPSSCT NNGLSTLQPP QMLVSRPQEK QNPPVGGGVK AYSGITDGGD 840
  841 APSSSTSPST NNCQISSSGF LNRSQSGPAI LIPDAAIDMS GNLVQDLYSK SDMRLKQELV 900
  901 GQQKSKASLT DHQLEASASG TSYGLDGGEN NRQQNFLAPT FGLDGDSRNS LLGGANVDNG 960
  961 FVPDTLLSRG YDSQKDLQNM LSNYGGVTND IGTEMSTSAV RTQSFGVPNV PAISNDLAVN1020
 1021 DAGVLGGGLW PAQTQRMRTY TKVQKRGSVG RSIDVNRYRG YDELRHDLAR MFGIEGQLED1080
 1081 PQTSDWKLVY VDHENDILLV GDDPWEEFVN CVQSIKILSS AEVQQMSLDG NFAGVPVTNQ1140
 1141 ACSGGDSGNA WRGHYDDNSA TSFNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] deduced N/A No confident structure predictions are available.
    2 View Details [116..270] PSI-BLAST 13.69897 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [271..497] deduced N/A No confident structure predictions are available.
    4 View Details [498..556] deduced N/A No confident structure predictions are available.
    5 View Details [557..795] deduced N/A No confident structure predictions are available.
    6 View Details [796..912] deduced N/A No confident structure predictions are available.
    7 View Details [913..1165] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle