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Protein Overview: gi|15242771

General Information:
Name(s) found: gi|15242771 [NCBI NR]
Description(s) found:
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  • gi|15242771|ref|NP_195970.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • transcriptional co-activator-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Transcriptional co-activator-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATATYPPPP PYYRLYKDFS ENTDSAPEPP PPIEGTYVCF GGNYTTEDVL PSLEEQGVPQ  60
   61 LYPKDSNLDY KKELRSLNRE LQLHILELAD VLVDRPSQYA KRIGEISSIF KNLHHLLNSL 120
  121 RPHQARATLI HIMELQIQQR KQAVEDIKRR REEAQGLLKD AFVTLDDVCN LMIQQVKPIS 180
  181 SLFNVTREPA FSSAGYEIAA IERDWCKLSK APGYDTRLRE YTVKLVLEKH FASCGKITHI 240
  241 YVPRDFERGI LKSVAFMCIK GEGGEEKALL LSGTDAGGWT AIVKPALWQK EIMDPWLPGM 300
  301 PKLETHRVRV TGYDTCVPKI DIQMALCEHF SSCGEVTQVV VLPSGSGSIY LQGERCEDKA 360
  361 LQLNGCKMGG MNLAYELKKK KMEMEMEMEM GEKKKKKKIE LMKVDKVLKK HMANKKKMDM 420
  421 STKKEDGDGE FGHGSLLGED EPL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..60] Pfam 4.055517 No description for PF05983.2 was found. No confident structure predictions are available.
    2 View Details [61..180] PSI-BLAST 7.39794 Structure of the mediator MED7/MED21 subcomplex
    3 View Details [181..443] PSI-BLAST 44.522879 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle