YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: BASS5_ARATH

General Information:
Name(s) found: BASS5_ARATH [Swiss-Prot]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • Probable sodium/metabolite cotransporter BASS5, chloroplastic OS=Arabidopsis thaliana GN=BASS5 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 407 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    plastid [IDA]
    Biological Process: sodium ion transport [ISS]
    response to wounding [IDA][IEP]
    response to jasmonic acid stimulus [IEP]
    glucosinolate biosynthetic process [IMP]
    Molecular Function: bile acid:sodium symporter activity [ISS]
    transporter activity [IMP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVISPTETL FLKSQHRLLQ PRNYSYALAF HSTRRVANFP RNSFSSLGSC SVDFPLRSNP  60
   61 ISQNSKSIHP WRRYVSESDS NELYHKKVSS IMETLKQAYS FIPHGILLST ILALVYPPSF 120
  121 TWFKPRYFVP GLGFMMFAVG INSNERDFLE ALKRPDAIFA GYIGQYLIKP LLGYIFGVIA 180
  181 VSLFNLPTSI GAGIMLVSCV SGAQLSNYTT FLTDPSLAAL SIVMTSISTA TAVLVTPMLS 240
  241 LLLIGKKLPV DVFGMISSIL QVVITPIAAG LLLNRLFPRL SNAIKPFLPA LTVIDMSCCI 300
  301 GAPLALNIDS ILSPFGATIL FLVITFHLLA FVAGYFFTGF FFSKAPDVKA LQRTISYETG 360
  361 MQSSLLALAL ATKFFQDPLV GVPPAISTVV MSLMGVSLVT IWKNRKE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..328] Pfam 63.60206 No description for PF01758.7 was found. No confident structure predictions are available.
    2 View Details [329..407] MSA 4.406995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle