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Protein Overview: gi|42572829

General Information:
Name(s) found: gi|42572829 [NCBI NR]
Description(s) found:
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  • gi|42572829|ref|NP_974511.1| malonyl-CoA decarboxylase family protein [Arabidopsis thaliana] [NCBI NR]
  • malonyl-CoA decarboxylase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Malonyl-CoA decarboxylase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | malonyl-CoA decarboxylase family protein | chr4:2113563-2116523 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • malonyl-CoA decarboxylase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | malonyl-CoA decarboxylase family protein | chr4:2113565-2116525 FORWARD LENGTH=517 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Malonyl-CoA decarboxylase OS=Arabidopsis thaliana GN=At4g04320 PE=2 SV=1 [ARATH-contam.fasta]
  • Isoform of Q7Y1Z8, Malonyl-CoA decarboxylase OS=Arabidopsis thaliana GN=At4g04320 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 517 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fatty acid biosynthetic process [IEA]
    Molecular Function: malonyl-CoA decarboxylase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKNLAILL RARMRSNNPS KFSLSQFPEI QSNPQENHSR DHIVQNSNDF GTTGRVYDVV  60
   61 RETMHSAISA SKTGVLDITL NDFQEGYFSL SLEDREKLLL VLAKEYDVNR EQVRELVKQY 120
  121 LGLETPASDD DKGALSSVFY RIERNLRHAL RPTYEVLFER LNTHPGGLRF LSILRADLLS 180
  181 ILSKENTPSL RTLDSFLKEK LGMWLSPATL ELHQITWDDP ASLLEKIVAY EAVHPISNLL 240
  241 DLKRRLGIGR RCFGYFHPSV PGEPLIFIEV ALMETVAQTI QEVLWDNPPI PENQATCALF 300
  301 YSISSTQPGL AGINLGKFLI KRVITLVKKD MPHVSTFATL SPIPGFMQWL LSKLSSQSRF 360
  361 AEDERGTQSN SPSSTFSEKV LLPEEEHALM TLSDESSSGS NGMEVLLNLL SVKNCDWATS 420
  421 PRLLPVLEPI LMRLCARYLL QEKKRGKALD SVANFHLQNG AMVERINWMA DRSEKGIRQS 480
  481 GGIMVNYVYR LENIEDYAQS YFGSGKIHAS PGIHSRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..69] deduced N/A No confident structure predictions are available.
    2 View Details [70..187] MSA 2.044986 View MSA. No confident structure predictions are available.
    3 View Details [188..364] deduced N/A No confident structure predictions are available.
    4 View Details [365..517] MSA 2.048969 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle