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Protein Overview: COPG_ARATH

General Information:
Name(s) found: COPG_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • Coatomer subunit gamma OS=Arabidopsis thaliana GN=At4g34450 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 886 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    membrane [IDA]
    Biological Process: vesicle-mediated transport [IEA]
    intracellular protein transport [IEA]
    Molecular Function: protein binding [IEA]
    structural molecule activity [IEA]
    clathrin binding [ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQPLVKKDD DHDDELEYSP FMGIEKGAVL QEARVFNDPQ VDPRRCSQVI TKLLYLLNQG  60
   61 ESFTKVEATE VFFSVTKLFQ SKDTGLRRMV YLIIKELSPS SDEVIIVTSS LMKDMNSKID 120
  121 MYRANAIRVL CRIIDGTLLT QIERYLKQAI VDKNPVVSSA ALVSGLHLLK TNPEIVKRWS 180
  181 NEVQEGIQSR SALVQFHALA LLHQIRQNDR LAVSKLVGSL TRGSVRSPLA QCLLIRYTSQ 240
  241 VIRDMANHGQ SGERPFYEFL ESCLRHKAEM VILEAARAIT ELDGVTSREL TPAITVLQLF 300
  301 LSSPRPVLRF AAVRTLNKVA MTHPMAVTNC NIDMESLISD QNRSIATLAI TTLLKTGNES 360
  361 SVERLMKQIT NFMSDIADEF KIVVVDAIRS LCVKFPLKYR SLMTFLSNIL REEGGFEYKR 420
  421 AIVDSIVTII RDIPDAKESG LLHLCEFIED CEFTYLSTQI LHFLGIEGPN TSDPSKYIRY 480
  481 IYNRVHLENA TVRAAAVSTL AKFGFMVESL KPRITVLLKR CIYDSDDEVR DRATLYLSVL 540
  541 GGDGTVDTDK ESKDFLFGSL EVPLVNMETS LKNYEPSEEA FDINSVPKEV KSQPLAEKKA 600
  601 QGKKPTGLGA PPAAPASGFD GYERLLSSIP EFAAFGKLFK SSLPVELTEA ETEYAVNVVK 660
  661 HIFDSHVVFQ YNCTNTIPEQ LLERVNVIVD ASEAEEFSEV TSKALNSLPY DSPGQAFVVF 720
  721 EKPAGVPAVG KFSNTLTFVV KEVDPSTGEA EDDGVEDEYQ LEDLEVVAGD YMVKVGVSNF 780
  781 RNAWESMDEE DERVDEYGLG QRESLGEAVK AVMDLLGMQT CEGTETIPLN ARSHTCLLSG 840
  841 VYIGNVKVLV RAQFGMDSSK DIAMKLTVRA EDVSVAEAIH EIVASG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..611] PSI-BLAST 100.0 No description for 2vglB was found.
    2 View Details [612..886] PSI-BLAST 58.69897 Structural Identification of a conserved appendage domain in the carboxyl-terminus of the COPI gamma-subunit.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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