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Protein Overview: gi|42573127, gi|...

General Information:
Name(s) found: gi|42573127 [NCBI NR]
gi|110738311 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|42573127|ref|NP_974660.1| agenet domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110738311|dbj|BAF01084.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 393 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRKGSRVE VFSNKEAPYG AWRCAEIVSG NGHTYNVRFY SFQIEHEEAV MEKVPRKIIR  60
   61 PCPPLVDVER WDTGELVEVL DNFSWKAATV REELSGHYYV VRLLGTPEEL TFHKVNLRAR 120
  121 KSWQDERWVA IGKISGSLKS STLTGSDVHQ KLQPHRNSMP LHEPSVVSAR LLKRPSPYNW 180
  181 SECAESCTGN PKKMRSLEKE GQQQKVDAIS CRPENRGGKS HVQASLNNHK TGYCQIVRVR 240
  241 SKGFSESVRA DDCSDSDVCS VGSCSATSYD ESNMPPCMLD GSTQQADSCS SDAESSCGLG 300
  301 EEPRWKHSSV GDGARNSCRS ELYSYRSTLG ELFSSGPLSW EQEASLTDLR LSLNISDDEH 360
  361 LMEEQCCLIR ACRPFASRGL TLMLGFTPSP LTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] PSI-BLAST 28.0 Structure of the N-terminal domain of Fragile X Mental Retardation Protein
    2 View Details [221..306] deduced N/A No confident structure predictions are available.
    3 View Details [307..393] PSI-BLAST 23.0 Crystal structure of novel protein EMSY truncate


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle