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Protein Overview: PP285_ARATH

General Information:
Name(s) found: PP285_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30694644|ref|NP_191302.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g57430, chloroplastic; Flags: Precursor [NCBI NR]
  • Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2 [Swiss-Prot]
  • pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pentatricopeptide (PPR) repeat-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr3:21266708-21269380 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21255731-21258403 REVERSE LENGTH=890 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 890 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: chloroplast RNA processing [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCPLAFTFS LPSIFPFPSQ LLPFSRHKHP YLLRATPTSA TEDVASAVSG APSIFISQSR  60
   61 SPEWWIDLLR SKVRSNLLRE AVLTYVDMIV LGIKPDNYAF PALLKAVADL QDMELGKQIH 120
  121 AHVYKFGYGV DSVTVANTLV NLYRKCGDFG AVYKVFDRIS ERNQVSWNSL ISSLCSFEKW 180
  181 EMALEAFRCM LDENVEPSSF TLVSVVTACS NLPMPEGLMM GKQVHAYGLR KGELNSFIIN 240
  241 TLVAMYGKLG KLASSKVLLG SFGGRDLVTW NTVLSSLCQN EQLLEALEYL REMVLEGVEP 300
  301 DEFTISSVLP ACSHLEMLRT GKELHAYALK NGSLDENSFV GSALVDMYCN CKQVLSGRRV 360
  361 FDGMFDRKIG LWNAMIAGYS QNEHDKEALL LFIGMEESAG LLANSTTMAG VVPACVRSGA 420
  421 FSRKEAIHGF VVKRGLDRDR FVQNTLMDMY SRLGKIDIAM RIFGKMEDRD LVTWNTMITG 480
  481 YVFSEHHEDA LLLLHKMQNL ERKVSKGASR VSLKPNSITL MTILPSCAAL SALAKGKEIH 540
  541 AYAIKNNLAT DVAVGSALVD MYAKCGCLQM SRKVFDQIPQ KNVITWNVII MAYGMHGNGQ 600
  601 EAIDLLRMMM VQGVKPNEVT FISVFAACSH SGMVDEGLRI FYVMKPDYGV EPSSDHYACV 660
  661 VDLLGRAGRI KEAYQLMNMM PRDFNKAGAW SSLLGASRIH NNLEIGEIAA QNLIQLEPNV 720
  721 ASHYVLLANI YSSAGLWDKA TEVRRNMKEQ GVRKEPGCSW IEHGDEVHKF VAGDSSHPQS 780
  781 EKLSGYLETL WERMRKEGYV PDTSCVLHNV EEDEKEILLC GHSEKLAIAF GILNTSPGTI 840
  841 IRVAKNLRVC NDCHLATKFI SKIVDREIIL RDVRRFHRFK NGTCSCGDYW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..755] PSI-BLAST 5.0 Clathrin D6 Coat
    2 View Details [756..890] PSI-BLAST 14.045757 No description for 2gw1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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