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Protein Overview: DOF36_ARATH

General Information:
Name(s) found: DOF36_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|62320152|dbj|BAD94355.1| zinc finger protein OBP3 [Arabidopsis thaliana] [NCBI NR]
  • gi|55584042|sp|Q9M2U1.2|DOF36_ARATH RecName: Full=Dof zinc finger protein DOF3.6; Short=AtDOF3.6; AltName: Full=OBF-binding protein 3 [NCBI NR]
  • gi|42565953|ref|NP_191097.3| OBP3 (OBF-BINDING PROTEIN 3); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|225898721|dbj|BAH30491.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|190194431|gb|ACE73109.1| At3g55370 [Arabidopsis thaliana] [NCBI NR]
  • Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6 PE=1 SV=2 [Swiss-Prot]
  • Dof-type zinc finger domain-containing protein [Arabidopsis thaliana]gi|55584042|sp|Q9M2U1|DF36_ARATH Dof zinc finger protein DOF3.6 (AtDOF3.6) (OBF binding protein 3) [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Dof zinc finger protein DOF3.6 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: OBP3 | OBP3 (OBF-BINDING PROTEIN 3); DNA binding / transcription factor | chr3:20538175-20539853 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Dof zinc finger protein DOF3.6 (AtDOF3.6) (OBF-binding protein 3) [nr-271106-contam.fasta]
  • OBP3 (OBF-BINDING PROTEIN 3); DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • zinc finger protein OBP3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: OBP3 | OBF-binding protein 3 | chr3:20527198-20528876 FORWARD LENGTH=323 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 323 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: photomorphogenesis [IMP]
    positive regulation of transcription [IEP]
    Molecular Function: DNA binding [IDA][ISS]
    transcription factor activity [IEP][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA GSSQARVNSM  60
   61 VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR HFCKTCRRYW TRGGSLRNVP 120
  121 VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL 180
  181 PPLQSLGDYN SSNTGLDFGG TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL 240
  241 VQSSNALYPL LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY 300
  301 TSWGGNSSWT GFTSNNSTGH LSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..200] FFAS03 1.07 Eea1; Eea1 homodimerisation domain
    2 View Details [201..323] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle