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Protein Overview: PTA10_ARATH

General Information:
Name(s) found: PTA10_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Protein PLASTID TRANSCRIPTIONALLY ACTIVE 10 OS=Arabidopsis thaliana GN=PTAC10 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 668 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQICQTKLNF TFPNPTNPNF CKPKALQWSP PRRISLLPCR GFSSDEFPVD ETFLEKFGPK  60
   61 DKDTEDEARR RNWIERGWAP WEEILTPEAD FARKSLNEGE EVPLQSPEAI EAFKMLRPSY 120
  121 RKKKIKEMGI TEDEWYAKQF EIRGDKPPPL ETSWAGPMVL RQIPPRDWPP RGWEVDRKEL 180
  181 EFIREAHKLM AERVWLEDLD KDLRVGEDAT VDKMCLERFK VFLKQYKEWV EDNKDRLEEE 240
  241 SYKLDQDFYP GRRKRGKDYE DGMYELPFYY PGMVCEGTVT TLHLYQGAFV DIGGVHEGWV 300
  301 PIKGNDWFWI RHFIKVGMHV IVEITAKRDP YRFRFPLELR FVHPNIDHMI FNKFDFPPIF 360
  361 HRDGDTNPDE IRRDCGRPPE PRKDPGSKPE EEGLLSDHPY VDKLWQIHVA EQMILGDYEA 420
  421 NPAKYEGKKL SELSDDEDFD EQKDIEYGEA YYKKTKLPKV ILKTSVKELD LEAALTERQH 480
  481 HNKLMMEAKA RGEGYKIDKL RRNIEMDEYD FLHWRRSLEE REALLRDISS RQALGLPLEE 540
  541 PGRYKPGSFF GKDQYDPTSA LYQYDYWGEP KNSEISKQER MKDAHNKSIV GKGNVWYDMS 600
  601 YDDAIKQTIE KRKEGSTLAS QEEETESEEE EEDDDDFDDF DYSILSDESS IGYSEQQPLV 660
  661 NGTQVLTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..386] FFAS03 2.12 No description for 2oceA was found.
    2 View Details [387..491] FFAS03 2.2 Crystal structure of intact alpha subunit of aIF2 from Pyrococcus abyssi
    3 View Details [492..668] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.058699327370023 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle