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Protein Overview: gi|15230070

General Information:
Name(s) found: gi|15230070 [NCBI NR]
Description(s) found:
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  • gi|15230070|ref|NP_189621.1| hAT dimerisation domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • hAT dimerisation domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 HAT dimerisation domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | hAT dimerisation domain-containing protein | chr3:11597946-11599556 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • protein dimerization [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | General transcription factor 2-related zinc finger protein | chr3:11595467-11597077 REVERSE LENGTH=536 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • General transcription factor 2-related zinc finger protein OS=Arabidopsis thaliana GN=At3g29765 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 536 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSPPIQKDI VHCFSEEVTR SIIEEMDNDV FGLLVDESAD ASDKEQMAVV FRFVDKYGVV  60
   61 KERFIGVIHV QETSSLSLKS AIDSLFAKYG LSLKKLRGKG YDGASNMKGK FNGLRSLILK 120
  121 ENSSAYYVHC FAHQLQLVVM AVAKKHVEVG EFFYMISVLL NVVGASCKRK DKIREIDRQK 180
  181 VEEKISNGEI KTGTGLNQEL SLQRPGNTRW GSHYKTLLRL EELFSSIVIV LEYIQDEGTD 240
  241 TTKRQQAYGI LKYFHTFDFV FYLELMLLVM GLTDSLSKAL QRKDQDILNA ISLVKTTKCQ 300
  301 LQKVRDDGWD AFMAEVSSFS EKTNTGMLKM EEEFVDSRRP RKKTGITNLH HYKVDCFYTV 360
  361 LDMQLQEFND CFDELNSELL ICMSSLSPID SFRQFDKSML VRLTEFYPDD FSFVERRSLD 420
  421 HQLEIYLDNV KNDERFTDLE HLGDLARVMV ETRKHLSHPL VYRLLKLSLI LPVATATVVR 480
  481 CFSAMNFVKT TLRNRFGDVF LSDCLVCFIE KQVLNTVTNE SVIKRFQDMS ERRVHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..536] PSI-BLAST 30.0 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle