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Protein Overview: GOGC6_ARATH

General Information:
Name(s) found: GOGC6_ARATH [Swiss-Prot]
Description(s) found:
Found 8 descriptions.
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  • Golgin candidate 6 OS=Arabidopsis thaliana GN=GC6 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 914 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    Golgi apparatus [IDA]
    Biological Process: intracellular protein transport [IEA]
    Golgi vesicle transport [ISS]
    Molecular Function: protein transporter activity [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLASRYKGV VGMVFGDNQS SNEDSYIQRL LDRISNGTLP DDRRTAIVEL QSVVAESNAA  60
   61 QLAFGAAGFP VIVGILKDQR DDLEMVRGAL ETLLGALTPI DHARAQKTEV QAALMNSDLL 120
  121 SREAENITLL LSLLEEEDFY VRYYTLQILT ALLMNSQNRL QEAILTTPRG ITRLMDMLMD 180
  181 REVIRNEALL LLTHLTREAE EIQKIVVFEG AFEKIFSIIK EEGGSDGDVV VQDCLELLNN 240
  241 LLRSSSSNQI LLRETMGFEP IISILKLRGI TYKFTQQKTV NLLSALETIN MLIMGRADTE 300
  301 PGKDSNKLAN RTVLVQKKLL DYLLMLGVES QWAPVAVRCM TFKCIGDLID GHPKNRDILA 360
  361 SKVLGEDRQV EPALNSILRI ILQTSSIQEF VAADYVFKTF CEKNTEGQTM LASTLIPQPH 420
  421 PTSRDHLEDD VHMSFGSMLL RGLCSGEADG DLETCCRAAS ILSHVVKDNL RCKEKALKIV 480
  481 LESPMPSMGT PEPLFQRIVR YLAVASSMKS KEKSSTLGKS YIQQIILKLL VTWTVDCPTA 540
  541 VQCFLDSRHH LTFLLELVTD PAATVCIRGL ASILLGECVI YNKSIENGKD AFSVVDAVGQ 600
  601 KMGLTSYFSK FEEMQNSFIF SPSKKPPQGY KPLTRTPTPS EAEINEVDEV DEMVKGNEDH 660
  661 PMLLSLFDAS FIGLVKSLEG NIRERIVDVY SRPKSEVAVV PADLEQKSGE NEKDYINRLK 720
  721 AFIEKQCSEI QNLLARNAAL AEDVASSGRN EQSQGSEQRA STVMDKVQME SIRRELQETS 780
  781 QRLETVKAEK AKIESEASSN KNMAAKLEFD LKSLSDAYNS LEQANYHLEQ EVKSLKGGES 840
  841 PMQFPDIEAI KEEVRKEAQK ESEDELNDLL VCLGQEESKV EKLSAKLIEL GVDVDKLLED 900
  901 IGDESEAQAE SEED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..535] FFAS03 3.98 No description for 2gl7A was found.
    2 View Details [536..914] PSI-BLAST 4.045757 No description for 2dfsA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.38363524631144 bayes_pls_golite062009
  • clathrin binding
    		•  2.23233599894789 bayes_pls_golite062009
  • protein transporter activity
    		•  1.84250643947717 bayes_pls_golite062009
  • protein binding
    		•  1.81870125631028 bayes_pls_golite062009
  • transporter activity
    		•  1.12250209220616 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.68280791022469 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  0.142369414135278 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle