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Protein Overview: gi|30679794

General Information:
Name(s) found: gi|30679794 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30679794|ref|NP_187280.2| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1720 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFRPFGKDL GPMSSKPAPF TPFGASSTTR LYLSFLFLHT ANVGFACSDS SIQPPASQNH  60
   61 SAFAGQSFGP GGIRSGPSIQ RAPPLSASQN PQLSIGKPYR PGGVQSVPPI NRIPSPSAFQ 120
  121 NPSPSSGQPY QPGGIQRIPE PFNGIAWGPE ASRTSPSVRP YQFPGVQRPN LNPQYGHDGS 180
  181 RNFLKDHGEH SRATSPPATS HILSRMGTDA VEIGRSQDSK RKSRSDILPD QNMGFSRRNQ 240
  241 SPVSGFENGN LVDGFQPLSS RTWMRSPSSA ENNPVRSRSN PNQLIHQEQT GNSSFPYAHE 300
  301 VAEIQEATRR KSSAVAPSDK PLGDDPILSQ HDSQRFSTSP PTSGTKSYTL SRSSDSQFPG 360
  361 QPSSVNSFNN ARKTNSSPAT KRTRSPPVYP IEEDIPRNSF PSQDCTEGEE QARAKRLARF 420
  421 KGELEPIADR PVDIQLTKSP VNKTMKPLDN KQTFNSLESS RDALKGDALP DYENSEQPSL 480
  481 IIGVCPDMCP ESERGERERK GDLDHYERVD GDRNQTSKSL AVKKYTRTAE REAILIRPMP 540
  541 ILQNTMEYLL SLLDRPYNEN FLGMYNFLWD RMRAIRMDLR MQHIFNQEAI TLLEQMIRLH 600
  601 IIAMHELCEY TKGEGFSEGF DAHLNIEQMN KTSVELFQMY DDHRKKGITV PTEKEFRGYY 660
  661 ALLKLDKHPG YKVEPSELSL DLANMTPEIR QTSEVLFARN VARACRTGNF IAFFRLARKA 720
  721 SYLQACLMHA HFSKVRLRTQ ALASLHSGLQ INQGLPVSDM SNWIGMEVFL PSLCYLVCIP 780
  781 FLVCHREVEE DIEALLEYHG FSIKVFEEPY MVKNDLFLHA DKDYKTKCSK LVHMKKSRTI 840
  841 VEDVSAPTVV EDVSTPFPLP SLITEATIGN QQCITAHKHE MPPARSLKKQ TSMRLFDKEV 900
  901 ADSKTSLLAE EDKPMGTFVM NPPGPFVINP VVHQEKQNDL TSAGGFHSPV KLYSPFGSPK 960
  961 FPQTKSSNLE KQPNDDRIGM SPGEIKFSII GDVYTNHVPG PALQQSPKSM PMEIMPVTTI1020
 1021 AECPTSVENK YALEESVPEA AMICTLEKEF NDIDEEDEDE DGVILNQYDE EVAKAKLKLI1080
 1081 IRLWKRWSSR QSELRERRQL AAAAALNSLS LGTPIRFSKT DQSRACGEFN IDQAMRRRFE1140
 1141 EREKSWSRLN ISDVIADILV GRNPESKCIS WKVVLCTQTK SVNSSSSASQ VTHSAASRWL1200
 1201 SSKLMPHAEH SSLNDDNLLF SAPGVSVWNK WVANGSDIDF TCCLSVARDV EAENDMCETT1260
 1261 CGASAVLFLA SGGLPLNLQR EQLNLILESV PNGSVLPLLV VISSCNGEHM EPDTDIVSGL1320
 1321 GLHDIDKSKI ASFSIVSIAN KSQKGQEVHF FNDSRLRDGF KWLASNSPLQ PNLHHVKLRE1380
 1381 LFLTHFSFSL ELLKQMPDQE VGPNICISAF NDALETSRRN ITSAAEANPI GWPCPETMLL1440
 1441 EDNRKECLMV KRYLPNLDWS SAENVELLSS VLENCKLPDF EDDLTWLTVG CASGAEIENH1500
 1501 TQRLEGCLIE YLTQRSNLMG VSLATKETGV MLERNTRLEL HNSSRYHITP RWIGIFQRIF1560
 1561 NWRIMGLFDA SSSSAYVLKS DLNMSTSSYA DKFLAEDASY PSCPPNLPLL HEMIEISCSP1620
 1621 LKSPPPYDDK AQRVVETGML IDDHRDIEES MLEKNREACR GIDLMITEDD ELGERSWRSK1680
 1681 GREAAEKKTI EKRESERLDE LLEKCNMVQN SIAEKLCIYF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..444] PSI-BLAST 3.522879 No description for 1y0fB was found.
    2 View Details [445..507] deduced N/A No confident structure predictions are available.
    3 View Details [508..615] deduced N/A No confident structure predictions are available.
    4 View Details [616..799] deduced N/A No confident structure predictions are available.
    5 View Details [800..1030] deduced N/A No confident structure predictions are available.
    6 View Details [1031..1232] deduced N/A No confident structure predictions are available.
    7 View Details [1233..1474] deduced N/A No confident structure predictions are available.
    8 View Details [1475..1625] deduced N/A No confident structure predictions are available.
    9 View Details [1626..1720] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle