YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|115646872, gi...

General Information:
Name(s) found: gi|30679518 [NCBI NR]
gi|115646872 [NCBI NR]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • gi|30679518|ref|NP_187199.2| RAD9 [Arabidopsis thaliana] [NCBI NR]
  • gi|115646872|gb|ABJ17148.1| At3g05480 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 439 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [ISS]
    regulation of DNA repair [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSISGNAL KTLSRSIICL ARVGNELVVQ ASPTQLALHT LNASRSAYQC ITFQSSFFDV  60
   61 YTVSGPQAHF SVLLKAVCSV LRTPLASIDH MSVQLPDHDA SKVKWTLQCY SGMKKTYWIT 120
  121 CNVEPDIQHL SLDRGRFPST LVMHPRNLSK LLGNFQSSLQ EITIIATDQT SFPSDAASEI 180
  181 GGKAVEFRSY VDPTKDGDSL LHTQLWIDPS EEFLQYTHAG DPVDITFSLK ELKAFLAFCE 240
  241 GCEADIHLFF EKAGEPILMA PKFGLGDGSS SSFDATLVLA TMLVSQLQEG IPAEPPEAAN 300
  301 STGGHAAEQV GSRPQERSRQ NASEHPSDHT RVWSELSGTA TKSVNGTEDR PQAQGQPDLD 360
  361 IHRIRNMEIS KGGPVGDTAP AAPPKSQRPT QIDHAEGSRV RVQNQSFSQH HPSNWVDANE 420
  421 EEEDDDEGVE ATPPHNEDY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 76.0 Prolifirating cell nuclear antigen (PCNA)
    2 View Details [288..439] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle