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Protein Overview: FBK59_ARATH

General Information:
Name(s) found: FBK59_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|15229067|ref|NP_188380.1| F-box family protein [Arabidopsis thaliana] [NCBI NR]
  • F-box/kelch-repeat protein At3g17530 OS=Arabidopsis thaliana GN=At3g17530 PE=2 SV=2 [Swiss-Prot]
  • F-box family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | F-box family protein | chr3:6000866-6002032 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | F-box and associated interaction domains-containing protein | chr3:6000860-6002026 FORWARD LENGTH=388 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 388 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMISDLPHDL ESEILSRVPA KSLAKWKTTC KRWYALFRDP SFVKKNFDKA GGREMIVLMN  60
   61 SRVYSNSVNL QGINNRFDPS MEVTGKLIKL NDSKGVDISA IFHCDGLILC TTTESTGLVV 120
  121 WNPCTGEIRC IKPRIFYRCN DRYALGYGNS KSSCHSYKIL RSCCYYVDQN LSLMAAEFEI 180
  181 YDFSTDSWRD LGDITRDMIV YSSGVSLKGN TYWVSGSKEK GFFMRYFDFS KEVFGRLPLP 240
  241 YQSFNANHTA ALSAVGNEKI AVLQQKILAM SDEMRIWVTN KIDEAKDLSW SNFLLTVDYG 300
  301 KFNLPCLVNV TSFLLDEENK VAVCSDVDTK DGLRSRIYIV GKDFYKEVFK DTRGSDNNWP 360
  361 LLLCYVPSLV SIQENIPNKA EENEIKGG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..267] PSI-BLAST 8.09691 No description for 2ovpB was found.
    2 View Details [268..388] Pfam 19.69897 No description for PF07734.4 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle