YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: NAC43_ARATH

General Information:
Name(s) found: NAC43_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: multicellular organismal development [ISS]
    embryonic development ending in seed dormancy [NAS]
    lignin biosynthetic process [IGI]
    anther dehiscence [IGI]
    secondary cell wall biogenesis [IGI][IMP]
    fruit dehiscence [IMP]
    Molecular Function: transcription factor activity [ISS]
    transcription activator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSKSMSISV NGQSQVPPGF RFHPTEEELL QYYLRKKVNS IEIDLDVIRD VDLNKLEPWD  60
   61 IQEMCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKIIY SNGRRIGMRK 120
  121 TLVFYKGRAP HGQKSDWIMH EYRLDDNIIS PEDVTVHEVV SIIGEASQDE GWVVCRIFKK 180
  181 KNLHKTLNSP VGGASLSGGG DTPKTTSSQI FNEDTLDQFL ELMGRSCKEE LNLDPFMKLP 240
  241 NLESPNSQAI NNCHVSSPDT NHNIHVSNVV DTSFVTSWAA LDRLVASQLN GPTSYSITAV 300
  301 NESHVGHDHL ALPSVRSPYP SLNRSASYHA GLTQEYTPEM ELWNTTTSSL SSSPGPFCHV 360
  361 SNGSG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] PSI-BLAST 64.30103 Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
    2 View Details [213..365] MSA 1.220995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle