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Protein Overview: gi|30683481, gi|...

General Information:
Name(s) found: gi|30683481 [NCBI NR]
gi|106879155 [NCBI NR]
Description(s) found:
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  • gi|30683481|ref|NP_565646.2| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|106879155|gb|ABF82607.1| At2g27330 [Arabidopsis thaliana] [NCBI NR]
  • RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 RNA recognition motif (RRM)-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | RNA recognition motif (RRM)-containing protein | chr2:11702428-11703641 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g27330 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • nucleic acid binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:11695350-11696563 REVERSE LENGTH=116 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g27330 OS=Arabidopsis thaliana GN=At2g27330 PE=4 SV=1 [ARATH-contam.fasta]
  • At2g27330 OS=Arabidopsis thaliana GN=At2g27330 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 116 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: nucleotide binding [IEA]
    nucleic acid binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTQFLYRSF TPLLFSRSFS STLFVKGISF SSTEETLTQA FSQYGQVLKV DVIMDKIRCR  60
   61 PKGFAYVTFS SKEEAEKALL ELNAQLVDGR VVILDTTKAA KHNPPDTKPN HAGGDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 24.09691 No description for 2dh7A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.43

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle