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Protein Overview: gi|30678017, gi|...

General Information:
Name(s) found: gi|30678017 [NCBI NR]
gi|110743887 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30678017|ref|NP_178365.2| DC1 domain-containing protein / PHD finger protein-related [Arabidopsis thaliana] [NCBI NR]
  • gi|110743887|dbj|BAE99778.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCGFCEGDK VGTCYYYCVT CDERYHKECV ESPLEITYPS HPQHSLQIYL STKPFEHCIL  60
   61 CSRKAHNIIY YCDVCDIYMH VLCAQATIPF FIDQPKRHDH TLTLFPRQAS LTCNVCGLVN 120
  121 KLHLTYVCSI CNFAAHSDCI HIPQTIRMSR HDHRISFTSS LPLGIWSCGV CRKEIDGDYG 180
  181 AYICNICSGY AVHTRCALRL DIWDGIDLEG VPEEDEEVEP FERISDGIIL HFSHGCQLKL 240
  241 TTYEVNGEEK FCQACVLPIN EKNLYVCVEC GFILHETCAD APRKKFHPLH PHPLKQRVAT 300
  301 ADLERGFSYL ACKRLSNSFR YECDKEGCDC VLDVVCASVS EPFDYQGHPH PLFLALDPKE 360
  361 KPICNICKST KVHKLLNCIE VECNFVICFT CATLPYMVRY KHDEHYLTFC RGDEAGGSDW 420
  421 CELCEGKLAI GGKEGFYKCT YCCTTLHINC LLGPDPYLKP DQTIPTDQIE VVLQRNNSAS 480
  481 RQICSKCNIR CPYPTFAVYT KEMVSHIRCA LTC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] FFAS03 2.45 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    2 View Details [99..372] PSI-BLAST 20.522879 No description for 2i13A was found.
    3 View Details [373..513] FFAS03 2.28 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.0196698141692984 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle