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Protein Overview: gi|42569161

General Information:
Name(s) found: gi|42569161 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|42569161|ref|NP_179561.2| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 937 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVLQRGFK PAKCKTALQM ANSRLKILKN KKEIQIKQLR RELAQLLESG QTPTARIRVE  60
   61 HVVREEKTVA AYELIGIYCE LLVVRLGVIE SQKNCPIDLK EAVTSVLFAS QRLSDVPELS 120
  121 EIFKQFTTKY GKDFSTSAVE LRPDSGVSRL LVEKLSAKAP DGPTKVKILM AIAEEHNVVW 180
  181 EAQSFVESDP KDTELLNGAN SFQPASSMNM DSSINSNKEQ PPNIHAPATV NAHHGSSERH 240
  241 HSPENSYANG GRSSSRSNNV TSGKADDYYH SKARPSRSRP DEGECRNPNH GYENSSSRNK 300
  301 QKWEPEFVDS TDAARAAAEA AERASFAARA AAELSNKERM TRQDSTQSHI SSASVNLRNE 360
  361 PSHRRDRSNA QRESFSEDHV SPRRNVRMQY EDMDRTRQDR YDRAEQIPPV DQPSGRHSVD 420
  421 NSRNNGSFGR EKQPSQDETD INVGYSEDVH LRKQSSRVSS HSHSSNYSDE NDLGSDFMKS 480
  481 PSIVEENIFA TEYDHQSQSS FKDIDSHDHG HDDDAAATDN YDDYSSFFYQ PKFHAEDNHY 540
  541 QDEIDHGVGF SLLGSKTSAS AASWSFKGDH SKSHGKHSSS SSQVFQENPS SRLFDDVSTS 600
  601 PPASYHEPDP HAKFDNYGPN SESDGDQPID KVSGDVHERG NLTSDRSHKF KVSDSAGHEV 660
  661 FPLDTEEHTD NSRTREESDS DSEPQLGLRL GALAGGFRNK KTLPPYRMSS ASSKAEKEYI 720
  721 QIDDFGQSSR KDLYSKKASN TETRPSFMPP HPSSSDEDDS DMQHPGRTET KSDSLYSHSR 780
  781 VNHDDSEEEK LPTRSSSRIQ ERSHKPSTGI RVQKRTNFKM PVSASSEDEE EVEREAARIN 840
  841 AKPNKTTGYG FSLRTKGQSK ANEKHSLPVT TKKTDKESHD QPSPRTVTSS HVPQTVKSPD 900
  901 PDTPSRERER ASHVHPNLPE YDDIFARLGA LRAPSRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..141] Pfam 62.408935 No description for PF03398.6 was found. No confident structure predictions are available.
    2 View Details [142..271] deduced N/A No confident structure predictions are available.
    3 View Details [272..371] deduced N/A No confident structure predictions are available.
    4 View Details [372..610] deduced N/A No confident structure predictions are available.
    5 View Details [611..768] deduced N/A No confident structure predictions are available.
    6 View Details [769..937] MSA 2.383996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle