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Protein Overview: gi|42569121

General Information:
Name(s) found: gi|42569121 [NCBI NR]
Description(s) found:
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  • gi|42569121|ref|NP_179401.2| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G36210.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G36210.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO48261.1); contains InterPro domain Protein [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G36210.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G36210.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO48261.1); contains InterPro domain Protein of unknown function DUF726 (InterPro:IPR007941) | chr2:7875011-7878419 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | Protein of unknown function (DUF726) | chr2:7867929-7871337 FORWARD LENGTH=656 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Uncharacterized protein OS=Arabidopsis thaliana GN=At2g18100 PE=2 SV=1 [ARATH-contam.fasta]
  • Uncharacterized protein OS=Arabidopsis thaliana GN=At2g18100 PE=4 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 656 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEATSNLTP SQRYAASALF AIALNQAQIS QSKPLGIPAT GSTGEPISSD SDPISDEADL  60
   61 WVHEVSGLLR PVLRCLQIDS SAWHGLEEIA ASTQAKDHIG AFIKLLSEDV SDDDDDSSEM 120
  121 VEKETALAKA ADAMDQNIRS SSLSVESKME KHVEFENECR DKYSVPEAQS GAEVKETESH 180
  181 GEGEIRDGGH NLGIVEHEKP VGEVALLSHE RKINVLYELL SACLADKHEE NEICTRRRKG 240
  241 YDARHHVALR LLATWFDFQW IKMEAVETMS ACSAMALQKS SGNKEEESLS PNSEWAKWKR 300
  301 GGIVGAAALT GGTLMAITGG LAAPAIAAGF GALAPTLGTI VPVIGASGFA AAAEAAGTVA 360
  361 GSVAVAASFG AAGAGLTGTK MARRTGDIEE FEFKAIGENH NQGRLAVEIL VAGFVLKEED 420
  421 FVKPWEGLTS NLERYTVQWE SENIIAVSTA IQDWLTSRVA MELMRQGAMR TVLNSLLAAM 480
  481 VWPATILVAA DFIDSRWSIA IDRSDKAGKL LAEALRKGLQ GNRPVTLVGF SLGARVVFKC 540
  541 LQTLAETEKN AEIVERVVLL GAPISIKNEN WRDVRKMVAG RFINVYATND WTLGVAFRAS 600
  601 LLSQGLAGIQ PVCIPGIEDV DVTDMVEGHS SYLWKTQQIL ERLELDNSYP VFRNTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..233] deduced N/A No confident structure predictions are available.
    2 View Details [234..401] MSA 2.042992 View MSA. No confident structure predictions are available.
    3 View Details [402..474] deduced N/A No confident structure predictions are available.
    4 View Details [475..656] MSA 8.060986 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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