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Protein Overview: gi|18158962, gi|...

General Information:
Name(s) found: gi|55669656 [NCBI NR]
gi|55669655 [NCBI NR]
gi|18158962 [NCBI NR]
gi|18158961 [NCBI NR]
Description(s) found:
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  • gi|55669656|pdb|1RG8|B Chain B, Human Acidic Fibroblast Growth Factor (Hafgf-1) At 1.10 Angstrom Resolution (140 Amino Acid Form) [NCBI NR]
  • gi|55669655|pdb|1RG8|A Chain A, Human Acidic Fibroblast Growth Factor (Hafgf-1) At 1.10 Angstrom Resolution (140 Amino Acid Form) [NCBI NR]
  • gi|18158962|pdb|1JQZ|B Chain B, Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form With Amino Terminal His Tag. [NCBI NR]
  • gi|18158961|pdb|1JQZ|A Chain A, Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form With Amino Terminal His Tag. [NCBI NR]
  • Chain B, Human Acidic Fibroblast Growth Factor (Hafgf-1) At 1.10 Angstrom Resolution (140 Amino Acid Form)gi|55669655|pdb|1RG8|A Chain A, Human Acidic Fibroblast Growth Factor (Hafgf-1) At 1.10 Angstrom Resolution (140 Amino Acid Form)gi|18158962|pdb|1J [nrdb_11152004_Chlamydomonas]
  • Chain B, Human Acidic Fibroblast Growth Factor (Hafgf-1) At 1.10 Angstrom Resolution (140 Amino Acid Form) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain A, Human Acidic Fibroblast Growth Factor (Hafgf-1) At 1.10 Angstrom Resolution (140 Amino Acid Form) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain B, Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form With Amino Terminal His Tag. [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Chain A, Human Acidic Fibroblast Growth Factor. 141 Amino Acid Form With Amino Terminal His Tag. [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
    • Organism: Homo sapiens
    Length: 146 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HHHHHHFNLP PGNYKKPKLL YCSNGGHFLR ILPDGTVDGT RDRSDQHIQL QLSAESVGEV  60
   61 YIKSTETGQY LAMDTDGLLY GSQTPNEECL FLERLEENHY NTYISKKHAE KNWFVGLKKN 120
  121 GSCKRGPRTH YGQKAILFLP LPVSSD

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|112491310 gi|18158962, gi|... gi|219109210, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] PSI-BLAST 47.0 NMR STUDY OF ACID FIBROBLAST GROWTH FACTOR BOUND TO 1,3,6-NAPHTHALENE TRISULPHONATE, 26 STRUCTURES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • fibroblast growth factor receptor binding
    		•  5.68976822724664 bayes_pls_golite062009
  • growth factor activity
    		•  5.6790632853895 bayes_pls_golite062009
  • receptor binding
    		•  4.8109037277027 bayes_pls_golite062009
  • cytokine activity
    		•  3.72907359340826 bayes_pls_golite062009
  • protein binding
    		•  2.99442649109752 bayes_pls_golite062009
  • binding
    		•  2.90110516688922 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  2.49177421879896 bayes_pls_golite062009
  • heparin binding
    		•  2.1616134585534 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.81686028727894 bayes_pls_golite062009
  • interleukin-1 receptor binding
    		•  0.8084616632765 bayes_pls_golite062009
  • pattern binding
    		•  0.323275442862789 bayes_pls_golite062009
  • nerve growth factor receptor binding
    		•  0.308245352535379 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle