YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|327815

General Information:
Name(s) found: gi|327815 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|327815|gb|AAB03744.1| gag protein [NCBI NR]
  • gag proteingi|120833|sp|P20873|GAG_HV1JR Gag polyprotein [Contains: Core protein p17 (Matrix protein); Core protein p24 (Core antigen); Core protein p2; Core protein p7 (Nucleocapsid protein); Core protein p1; Core protein p6] [nrdb_11152004_Chlamydomonas]
  • gag protein [nr-271106-contam.fasta]
    • Organism: Human immunodeficiency virus 1
    Length: 504 amino acids

    Gene Ontology:
    Cellular Component: cytosol [UNKNOWNLink to PubMed articleLink to PubMed articleLink to PubMed article][TAS]
    nucleoplasm [TAS]
    Biological Process: uncoating of virus [TAS]
    entry into host cell [TAS]
    viral reproduction [TAS]
    provirus integration [UNKNOWNLink to PubMed article][TAS]
    RNA-dependent DNA replication [TAS]
    initiation of viral infection [UNKNOWNLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGARASVLSG GELDRWEKIR LRPGGKKKYR LKHIVWASRE LERFAVNPGL LESSEGCRQI  60
   61 LGQLQPSLKT GSEELTSLYN TVATLYCVHQ RIEIKDTKEA LEKIEEEQTK SMKKAQQAAA 120
  121 DTGNSSQVSQ NYPIVQNLQG QMVHQAISPR TLNAWVKVIE EKAFSPEVIP MFSALSEGAT 180
  181 PQDLNTMLNT VGGHQAAMQM LKETINEEAA EWDRLHPVHA GPIAPGQMRE PRGSDIAGTT 240
  241 STLQEQIGWM TNNPPIPVGE IYKRWIILGL NKIVRMYSPV SILDIRQGPK EPFRDYVDRF 300
  301 YKTLRAEQAT QEVKNWMTET LLVQNANPDC KTILKALGPA ATLEEMMTAC QGVGGPGHKA 360
  361 RVLAEAMSQV TNPATIMMQR GNFRNQRKNV KCFNCGKEGH IARNCRAPRK KGCWKCGKEG 420
  421 HQMKECTERQ ANFLGKIWPS YKGRPGNFLQ SRPEPTAPPE ESFRFGEETA TPSQKQEQKQ 480
  481 EPIDKELYPL TSLRSLFGND PSSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle