YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: WOX8_ARATH

General Information:
Name(s) found: WOX8_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|79530393|ref|NP_199410.2| WOX8 (WUSCHEL RELATED HOMEOBOX 8); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|61217284|sp|Q6X7J5.1|WOX8_ARATH RecName: Full=WUSCHEL-related homeobox 8 [NCBI NR]
  • gi|37955180|gb|AAP37138.1| WOX8 protein [Arabidopsis thaliana] [NCBI NR]
  • WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2 SV=1 [Swiss-Prot]
  • WOX8 protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 WUSCHEL-related homeobox 8 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: WOX8 | WOX8 (WUSCHEL-related homeobox 8); DNA binding / transcription factor | chr5:18666148-18667925 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • WOX8; DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • WUSCHEL-related homeobox 8 [nr-271106-contam.fasta]
  • | Symbols: WOX8, STPL | WUSCHEL related homeobox 8 | chr5:18648921-18650698 FORWARD LENGTH=325 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: embryonic development ending in seed dormancy [IGI][IMP]
    positive regulation of cell proliferation [IGI]
    regulation of transcription, DNA-dependent [ISS]
    cotyledon development [IGI]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSNKNWPS MFKSKPCNNN HHHQHEIDTP SYMHYSNCNL SSSFSSDRIP DPKPRWNPKP  60
   61 EQIRILESIF NSGTINPPRE EIQRIRIRLQ EYGQIGDANV FYWFQNRKSR AKHKLRVHHK 120
  121 SPKMSKKDKT VIPSTDADHC FGFVNQETGL YPVQNNELVV TEPAGFLFPV HNDPSAAQSA 180
  181 FGFGDFVVPV VTEEGMAFST VNNGVNLETN ENFDKIPAIN LYGGDGNGGG NCFPPLTVPL 240
  241 TINQSQEKRD VGLSGGEDVG DNVYPVRMTV FINEMPIEVV SGLFNVKAAF GNDAVLINSF 300
  301 GQPILTDEFG VTYQPLQNGA IYYLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 14.09691 Homeobox protein hox-b1
    2 View Details [119..325] MSA 15.730997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle