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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|163040
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLACPGFWV LVVLGSSWAG WGNLGAEAAK LRQFYVAAQS IRWNYRPEST HLSSKPFETS  60
   61 FKKIVYREYE AYFQKEKPQS RTSGLLGPTL YAEVGDIMKV HFKNKAHKPL SIHAQGIKYS 120
  121 KFSEGASYSD HTLPMEKMDD AVAPGQEYTY EWIISEHSGP THDDPPCLTH IYYSYVNLVE 180
  181 DFNSGLIGPL LICKKGTLTE DGTQKMFEKQ HVLMFAVFDE SKSWNQTSSL MYTVNGYVNG 240
  241 TMPDITVCAH DHISWHLIGM SSGPELFSIH FNGQVLEQNH HKISAITLVS ATSTTANMTV 300
  301 SPEGRWTIAS LIPRHFQAGM QAYIDIKNCA KKTRNPKKLT RDQRRHIKRW EYFIAAEEVI 360
  361 WDYAPIIPAN MDKKYRSLHL DNFSNRIGKH YKKVVYKQYQ DDSFTKRLED PSSEGDGILG 420
  421 PIIRAQVRDT LKIVFKNMAS RSYSIYPHGV TFSPYDNEVN SSSTSGSNTM IRAVRPGETY 480
  481 TYKWNILESD EPTENDAQCL TRPYYSNVDI TRDLASGLIG LLLICKSRSL DRRGIQRAAD 540
  541 IEQQAVFAVF DENKSWYIED NIYKFCENPE KVKRDDPKFY ESNIMSTING YVPESIPILG 600
  601 FCFDDTVQWH FCSVGTQNDI LTIHFTGHSF IYGKRHEDTL TLFPMQGESV TVTMDNVGTW 660
  661 MLTTMNSNPR SKKLRLRFRD AKCIRNDDDD SYEIIYEPSG STAMTTKKIH DSSEIEDEND 720
  721 ADSDYQDELA LILGLRSFRN SSLNQEKDEL NLTALALEKD SEFIPPSANR SLDSNSSSRS 780
  781 HVSRLIAKNF AESLKTLLHL EAPAAGSPLE HAGLDKNSAL NPPMAEHSSP YSEDPREDHP 840
  841 LSDVTGVSLL PFGTGFKNRK PAKHQRFQVG RGQAAKHKFS QTRFPAHKTR TRLSQDNSSS 900
  901 SRMGPWEDIP SDLLLLQQKD PYKILNGEWH LVSEKGSYEI IQDANENKTV NKLPNSPQND 960
  961 SRTWGENIPF KNSHGKQSGH PTFLVTRRKP LQDRQDRRNS RLKEGLPLIR TRRKKKEEKP1020
 1021 AYHVPLSPRS FHPLRGEVNA SFSDRRHNHS LLLHASNETS LSIDLNQTFP SMNLSLAASL1080
 1081 PDHDQTSPND TTSQTSSPPD LYPTVSPEEH YQIFPIQDSD PTHSTTAPSN RSPDPTHSTT1140
 1141 APSNRSPPTQ PSQIPNYDLR NRAIPTDVSQ IFPSLELEVW QTATSLDLSQ PSISPDLGQM1200
 1201 ALSPDPGQES LSPDLGQTSL SPDLSQESLS PDLGQTALSP DPSQESLSPD LGQTALSPDP1260
 1261 SQESLSPDLG QTALSPDPGQ ESLSPDLGQT SLSPDLSQES LSPDLGQTAL SPDPSQESLS1320
 1321 PDLGQTALSP DPSQESLSPD LGQTSLSPDL GQESLSPDLG QTALSPDPSQ ESLSPDLGQT1380
 1381 SLSPDLGQES LSPDLGQTAL SPDLSQESLS PDLGQTPLSP DLSLESLSPD LSQLDLKQTS1440
 1441 PPLDLNQTSH TSESSQSLPL PEFGQTFPNA DIGQMPSPPP DSTLNNTFIP EEFNPLVVVG1500
 1501 LSRDDGDYIE IIPRQKEESS EEDYGEFEFV AYNDPYQTDL RTDINSSRNP DNIAAWYLRS1560
 1561 NTGNRKYYYI AAEEISWDYS KFVQSDDVDY VPEDTVYKKV VFRKYLDSTF TKLDPQGEYE1620
 1621 EHLGILGPVI RAEVDDVIQV RFKNLASRPY SLHAHGLSYE KSSEGKTYED DSPEWFKEDN1680
 1681 AIQPNKTYTY VWHATTRSGP ENPGSACRAW AYYSAVNPEK DIHSGLIGPL LICRKGTLDK1740
 1741 ETNMPVDMRE FVLLFMVFDE KKSWYYDKKP TRSWRRASSE VKNSHEFHAI NGMIYNLPGL1800
 1801 RMYEQEWVRL HLLNLGGSRD IHVVHFHGQT LLENGTQQHQ LGVWPLLPGS FKTLEMKASK1860
 1861 PGWWLLDTEV GEIQRAGMQT PFLIVDRECK MPMGLSTGLI ADSQIQASEF WGYWEPKLAR1920
 1921 LNNGGSYNAW IAEKLSTEFN PEPWIQVDMQ KEVLLTGIQT QGAKHYLKPY YTTEFCVAYS1980
 1981 LDRKNWRIFK GNSTRNVMYF GGNSDASTIK ENQIDPPVVA RYIRISPTGS YNKPALRLEL2040
 2041 QGCEVNGCST PLGMESGKIE NKQITASSFK KSWWGNYWEP FLARLNAQGR VNAWQAKANN2100
 2101 NNQWLQIDLL KIKKITAIVT QGCKSLSSEM YVKSYTIHYS DQGTDWKPYR EKSSMVDKIF2160
 2161 EGNNNVRGHV KNFFNPPIIS RFIRIIPKTW NQSIALRLEL FGCDMY

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