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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18253111
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AGAVAEEVLA AIRTVIAFGG QKKELERYNK NLEEAKRIGI KKAITANISI GAAFLLIYAS  60
   61 YALAFWYGTS LVLSSEYSIG QVLTVFFSVL IGAFSIGQAS PSIEAFANAR GAAYEIFKII 120
  121 DNKPSIDSYS KSGHKPDNIK GNLEFKNVHF SYPSRKEVKI LKGLNLKVQS GQTVALVGNS 180
  181 GCGKSTTVQL MQRLYDPTDG MVCIDGQDIR TINVRHLREI TGVVSQEPVL FATTIAENIR 240
  241 YGRENVTMDE IEKAVKEANA YDFIMKLPNK FDTLVGERGA RLSGGQKQRI AIARALVRNP 300
  301 KILLLDEATS ALDTESEAVV QVALDKARKG RTTIVIAHRL STVRNADVIA GFDDGVIVEK 360
  361 GNHDELMKEK GIYFKLVTMQ TRGNEIELEN ATGESKSESD ALEMSPKDSG SSLIKRRSTR 420
  421 RSIHAPQGQD RKLGTKEDLN ENVPSVSFWR ILKLNSTEWP YFVVGIFCAI INGGLQPAFS 480
  481 IIFSRIIGIF TRDEDPETKR QNSNMFSVLF LVLGIISFIT FFLQGFTFGK AGEILTKRLR 540
  541 YMVFRSMLRQ DVSWFDDPKN TTGALTTRLA NDAAQVKGAI GSRLAVITQN IANLGTGIII 600
  601 SLIYGWQLTL LLLAIVPIIA IAGVVEMKML SGQALKDKKE LEGAGKIATE AIENFRTVVS 660
  661 LTREQKFE

YRC Informatics Platform - Version 3.0
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