YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEPA_SORUN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLLLLGLV ALAEGLIHKV ALVKKKSLRQ SLWENGLLED FLKTHSLNPA SKYFPTEATT  60
   61 LSANQPLVNY MDMEYFGTIS IGTPPQEFTV IFDTGSSNLW VPSIYCSSPA CSNHNRFDPQ 120
  121 KSSTFKPTSQ TVSIAYGTGS MTGVLGYDTV QVAGIADTNQ IFGLSQSEPG SFLYYSPFDG 180
  181 ILGLAYPSIS SSGATPVFDN MWNQGLVSQD LFSVYLSSND QSGSVVMFGG IDSSYYTGSL 240
  241 NWVPLSSEGY WQITVDSITM NGQSIACNGG CQAIVDTGTS LLSGPTNAIA NIQSKIGASQ 300
  301 NSQGQMAVSC SSIKNLPDIV FTINGIQYPL PASAYILQSQ EGCSSGFQGM DIPTSSGELW 360
  361 ILGDVFIRQY FTVFDRANNQ VGLAPVA

Type	Start	End	Confidence
Signal Peptide	1	15	0.97
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	387	0.99