YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|155163
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMIFRFVTTL AASLPLLTFA APISFSHAKN EAVKIYRDHP VSFYCGCEIP WQGKKGIPDL  60
   61 ESCGYQVRKN ENRASRIEWE HVVPAWQFGH QLQCWQQGGR KNCTRTSPEF NQMEADLHNL 120
  121 TPAIGEVNGD RSNFSFSQWN GVDGVTYGQC EMQVNFKERT AMAQSVQRAI ARTYLYMSEQ 180
  181 YGLRLSKAQT QLMQAWNNQY PVSEWECVRD QRIEKVQGNS NLLCACKCPN

Type	Start	End	Confidence
Signal Peptide	1	28	0.95
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	230	0.99