YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1096067
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPLLRCVPR VLGSSVAGLR AAARLAFPAA PAAHPVCTRP FRVLSVRAGS ERRPASCGSR  60
   61 TLRCGCGCGS LHTDGDKAFV DFLSDEIKEE RKIQKHKTLP KMSGGWELEL NGTEAKLVRK 120
  121 VAGEKITVTF NINNSIPPTF DGEEEPSQGQ KVEEQEPELT STPNFVVEVI KNDDGKKALV 180
  181 LDCHYPEDEV GQEDEAESDI FSIREVSFQS TGESEWKDTN YTLNTDSLDW ALYDHLMDFL 240
  241 ADRGVDNTFA DELVELSTAL EHQEYITFLE DLKSFVKSQ

Type	Start	End	Confidence
Signal Peptide	1	28	0.88
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	279	0.99