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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20522008
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPANLSNLR GSSLRGSTRG SLRANSNSIW RNNGVEIFSR SSRDEDDEEA LKWAALEKLP  60
   61 TFDRLRKGLL FGSQGAAAEV DINDLGFQER KNLLERLVKV ADEDNEKFLL KLKNRIDRVG 120
  121 IDLPTIEVRY EHLNIDADAY VGSRSLPTFM NFMTNFVETL LNSLHILSSR KRQLTILKDI 180
  181 SGIIKPCRMT LLLGPPSSGK TTLLLALAGK LDPALKVTGK VSYNGHELHE FVPQRTAAYI 240
  241 SQHDLHIGEM TVRETLEFSA RCQGVGSRFE MLAELSRREK AANIKPDADI DIYMKAAATE 300
  301 GQEANVVTDY VLKILGLDIC ADTMVGDDMI RGISGGQKKR VTTGEMLVGP SKALFMDEIS 360
  361 TGLDSSTTYS IVNSLRQSVQ ILKGTAVISL LQPAPETYNL FDDIILLSDG YIVYQGPRDD 420
  421 VLEFFESMGF KCPQRKGVAD FLQEVTSKKD QQQYWSKRNE PYRFITSKEF AEAYQSFHVG 480
  481 RKLGDELATP FDKTKCHPAA LTNEKYGIGK KELLKVCTER ELLLMKRNSF VYMFKFSQLT 540
  541 IMALITMTLF FRTEMPRDTT DDGGIYAGAL FFVVIMIMFN GMSELAMTIF KLPVFYKQRD 600
  601 LLFFPSWAYA IPSWILKIPV TLVEVGLWVI LTYYVIGFDP NITRFLKQFL LLIVVNQMAS 660
  661 GMFRFIGAVG RTMGVASTFG SFALLLQFAL GGFVLSRDDV KSWWIWGYWI SPMMYSVNSI 720
  721 LVNEFDGKKW NHIVPGGNET LGSTVVKSRG FFPEAYWYWI GVGALVGFTV VFNFCYSLAL 780
  781 AYLNPFDKPQ AVLPEDGENA ENGEVSSQIP STDGGDSISE SQNNKKGMVL PFEPHSITFD 840
  841 DVVYSVDMPQ EMKEQGAGED RLVLLKGVSG AFRPGVLTAL MGVSGAGKTT LMDVLAGRKT 900
  901 GGYIDGEIKI SGYPKKQETF ARISGYCEQN DIHSPYVTVY ESLVYSAWLR LPQDVDEKTR 960
  961 KMFVDEVMEL VELGPLRSAL VGLPGVNGLS TEQRKRLTIA VELVANPSII FMDEPTSGLD1020
 1021 ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFDELF LMKRGGQEIY VGPLGRHSCH1080
 1081 LIKYFESNPG VAKIKEGYNP ATWMLEVTAS AQEMMLGIDF TEVYKNSDLY RRNKALISEL1140
 1141 GVPRPGSKDL HFETQYSQSF WTQCVACLWK QHWSYWRNPA YTAVRFIFTT FIALIFGTMF1200
 1201 WDLGTKVSKS QDLLNAMGSM YAAVLFLGVQ NASSVQPVVA IERTVFYRER AAGMYSAIPY1260
 1261 AFGQVSIEIP YIFVQSVFYG IIVYAMIGFE WDVGKFFWYL FIMFFTLLYF TFYGMMGVAV1320
 1321 TPNQNVASIV AAFFYGVWNL FSGFIIPRPR MPVWWRWYYW ANPVAWTLYG LVASQFGDIQ1380
 1381 TKLSDNETVE QFLRRYFGFK HDFLGVVAAV LTAYVFMFAF TFAFAIKAFN FQRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle