YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|393196
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRILSVTLC LFFIYLYIYK TYGKVKNTDE GLSNIYGAKY YLRSGLFNEK NGKGQKYEDL  60
   61 EEEKEGENDD EEDSNSEESI NDEENVLTEV QGQSENHAEQ GETGPGKAGE QGETGPGKAG 120
  121 EQGETGPGKA GEQGETGPGK AGEQGETGPG KAGEQGETGP GKAGEQGETG PGKAGEQGEP 180
  181 SHNKKNGNKK KESKKSRMNM LIGL

Type	Start	End	Confidence
Signal Peptide	1	16	0.54
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	204	0.97