YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228795
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVNSWSYFS IMFAQLAVIA SVMLFDLTAS VESASLSGSS TENLQTSSRH KRAPGWGKRN  60
   61 SLNEEILEES DNSQELLESV EELKRAPGWG KRSGELAFDS ALAAEKRAPG WGKRSEEFDL 120
  121 DDDSVDQDKR APGWGKRAPG WGKRAPGWGK RAPGWGKRAP GWGKRAPGWG KRAPGWGKRS 180
  181 GSDYCETLKE VADEYILLSY KIEEQRAADC GGEPPNSQG

Type	Start	End	Confidence
Signal Peptide	1	33	0.49
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	219	0.96