YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228034
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTFATLAIF ISACLALGSC GGYGSQIGYG SQIGYGSQIG YGSPIGHGSQ IGYGRPINVG  60
   61 LRRLSSVGHQ SGDGAAAASA AASGGNKGPV EIIAGGGTRY GASQNLRPIL LNSGYNGGLN 120
  121 DNIGRIAHIV GGGRSLVGGI NGGIYGGGHG GYGHPRFSVQ PASATLLYPG QNSYRSISSP 180
  181 VEYSKVILPV RAAAPVAKLF IPQNNYGNYG GSAGY

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	215	0.99