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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|227450
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GREYSPAATT SENGGGRRKQ KEKELDELKK EVNLDDHKLS LDELGRKYQV DLSRGLSNAR  60
   61 AAEVLAQDGP NALTPPPTTP EWVKFCRQLF GGFSILLWIG AILCFLAYGI QAAMEDEPSN 120
  121 DNLYLGVVLA AVVIVTGCFS YYQEAKSSKI MDSFKNMVPQ QALVIREGEK IQINAENVVV 180
  181 GDLVEVKGGD RVPADMRIIS SHGCKVDNSS LTGESEPQTR SPEFTHENPL ETRNICFFST 240
  241 NCVEGTARGI VISTGDRTVM GRIASLASGL EVGRTPIAME IEHFIRLITG VAVFLGLSFF 300
  301 ILSLILGYTW LEAVIFLIGI IVANVPEGLL ATVTVCLTLT AKRMARKNCL VKNLEAVETL 360
  361 GSTSTICSDK TGTLTQNRMT VAHMWFDNQI HEADTTEDQS GATFDKRSPT WAALSRIAGL 420
  421 CNRAVFKPGQ ENISISKRDT AGDASESALL KCIQLSCGSV KKMRDKNPKV TEIPFNSTNK 480
  481 YQLSIHEREE DPQGHILVMK GAPERILERC SRILLQGQEV PLDEEMKEAF QNAYLELGGL 540
  541 GERVLGFCHL YLPPDKFPRG FRFDADEVNF PTSDLCFVGL MSMIDPPRAA VPDAVGKCRS 600
  601 AGIKVIMVTG DHPITAKAIA KGVGIISEGN ETVEDIAARL NIPVSQVNPR EAKACVVHGS 660
  661 DLKDMTAEQL DEILRNHTEI VFARTSPQQK LIIVEGCQRQ GAIVAVTGDG VNDSPALKKA 720
  721 DIGIAMGIAG SDVSKQAADM ILLDDNFASI VTGVEEGRLI FDNLKKSIAY TLTSNIPEIT 780
  781 PFLLFIIANI PLPLGTVTIL CIDLGTDMVP AISLAYEAAE SDIMKRQPRN PRTDKLVNER 840
  841 LISMAYGQIG MIQALGGFFT YFVILAENGF LPARLLGVRL AWDDRSTNDL EDSYGQEWTY 900
  901 EQRKVVEFTC HTAFFASIVV VQWADLIICK TRRNSVFQQG MKNKILIFGL LEETALAAFL 960
  961 SYCPGMGVAL RMYPLKVTWW FCAFPYSLLI FAYDEVRKLI LRRYPGGWVE KETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle