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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1585595
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSNVLWPI LLAVVLLQIS VAFVSGAASG GVVLSDVNNM LRDAKVVTSE KPVVHSKQET  60
   61 EAPESSVELL RFVDDDEDSE DISSIERQDG RTMESKKMAD QVRLLTKQLN ALMLRRREDY 120
  121 EMLEHNLRKS LRLTTNANSV DADMRSELNQ LREELAALRS SQSGNKERLT VEWLQQTISE 180
  181 IRKQLVDLQR TASNVAQDVQ QRSSTFEDLA TIRSDYQQLK LDLAAQRERQ QQTEVYVQEL 240
  241 REEMLQQEQD FQHALVKLQQ RTRKDGSSAS VEEESCSQEA NQEQTGLETT ADHKRRHCRF 300
  301 QSEQIHQLQL AQRNLRRQVN GLRFHHIDER VRSIEVEQHR IANANFNLSS QIASLDKLHT 360
  361 SMLELLEDVE GLQTKMDKSI PELRHEISKL EFANAQITSE QSLIREEGTN AARSLQAMAV 420
  421 SVSVLQEERE GMRKLSANVD QLRTNVDRLQ SLVNDEMKNK LTHLNKPHKR PHHQNVQAQM 480
  481 PQDDSPIDSV LAETLVSELE NVETQYEAII NKLPHDCSEV HTQTDGLHLI APAGQRHPLM 540
  541 THCTADGWTT VQRRFDGSAD FNRSWADYAQ GFGAPGGEFW IGNFQLHHLT LDNCSRLQVQ 600
  601 MQDIYDNVWV AFYKRFYISS RADGYRLHIA EYSGNASDAL NYQQGMQFSA IDDDRDISQT 660
  661 HCAANYEGGW WFSHCQHANL NGRYNLGLTW FDAARNEWIA VKSSRMLVKR LPAVECQANA 720
  721 SASGAFVSVS GSAADAAPSS GATTTTTTAT AAPATVTTPK TNNSVVQFVA AGQA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle