YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12833594
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAAWRALS SVRAQAVTRA PVPALRGGSS ASLLSARCGL QPPSLLRAAR AYAAVQKPVQ  60
   61 PKQDDEPPSS AFIKEYKDII PNIEKVDDVV KRILSLEMAS RKEKLKIKQE QLMNKIVENP 120
  121 EDSRTLEAQI IALTVRIRNY EEHMQKHRKD KAHKRHLLMS IDRRKKLLKI LRQTNYDVFE 180
  181 KTCKELGVEY TLPPLHFQKV HRRFLAKKAL CIRVYQEVQK LKKQKRALKA AAAAAKKEKN 240
  241 GGVPENPSNA VPEKTQVN

Type	Start	End	Confidence
Signal Peptide	1	38	0.72
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	258	0.98