YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12833393
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVAAASAE LLIIGWYIFR VLLQVFLECC IYWVGFAFRN PPGTQPIARS EVFRYSLQKL  60
   61 AHTVSRTGRQ VLGERSSEPP TEAPAPSPGR PCHQVLLCFS TAWEPVPRRN GGSLCLLVRV 120
  121 ALAKVSEGPV APRKAAPTMM KISVPFPAPL PLSHYRRVGE EGGRGEQPSR YGRRHHILIW 180
  181 TKSEQYHLSR TRSYHEDRTA HQPAEWTF

Type	Start	End	Confidence
Cytoplasmic	1	15	0.73
Transmembrane Helix	16	36	0.86
Non-Cytoplasmic	37	208	0.87