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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|358960
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CAVGPTTDRR TLPTRRACRG PQPEPALSPS CATLTACPPS SRGAAKMGDL KDDKSSPKKS  60
   61 KAKERRDLDD LKKEVAMTEH KMSVEEVCRK YNTDCVQGLT HSKAQEILAR DGPNALTPPP 120
  121 TTPEWVKFCR QLFGGFSILL WIGAILCFLA YGIQAGTEDD PSGDNLYLGI VLAAVVIITG 180
  181 CFSYYQEAKS SKIMESFKNM VPQQALVIRE GEKMQVNAEE VVVGDLVEIK GGDRVPADLR 240
  241 IISAHGCLKD NSSLTGESEP QTRSPDCTHD NPLETRNITF FSTNCVEGTA RGVVVATGDR 300
  301 TVMGRIATLA SGLEVGKTPI AIEIEHFIQL ITGVAVFLGV SFFILSLILG YTWLEAVIFL 360
  361 IGIIVANVPE GLLATVTVCL TLTAKRMARK NCLVKNLEAV ETLGSTSTIC SDKTGTLTQN 420
  421 RMTVAHMWFD NQIHEADTTE DQSGTSFDKS SHTWVALSHI AGLCNRAVFK GGQDNIPVLK 480
  481 RDVAGDASES ALLKCIELSS GSVKLMRERN KKVAEIPFNS TNKYQLSIHE TEDPNDNRYL 540
  541 LVMKGAPERI LDRCATILLQ GKEQPLDEEM KEAFQNAYLE LGGLGERVLG FCHYYLPEEQ 600
  601 FPKGFAFDCD DVNFTTDNLC FVGLMSMIDP PRAAVPDAVG KCRSAGIKVI MVTGDHPITA 660
  661 KAIAKGVGII SEGNETVEDI AARLNIPVSQ VNPRDAKACV IHGTDLKDFT SEQIDEILQN 720
  721 HTEIVFARTS PQQKLIIVEG CQRQGAIVAV TGDGVNDSPA LKKADIGVAM GIAGSDVSKQ 780
  781 AADMILLDDN FASIVTGVEE GRLIFDNLKK SIAYTLTSNI PEITPFLLFI MANIPLPLGT 840
  841 ITILCIDLGT DMVPAISLAY EAAESDIMKR QPRNPRTDKL VNERLISMAY GQIGMIQALG 900
  901 GFFSYFVILA ENGFLPGNLV GIRLNWDDRT VNDLEDSYGQ QWTYEQRKVV EFTCHTAFFV 960
  961 SIVVVQWADL IICKTRRNSV FQQGMKNKIL IFGLFEETAL AAFLSYCPGM DVALRMYPLK1020
 1021 PSWWFCAFPY SFLIFVYDEI RKLILRRNPG GWVEKETYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle