YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40063673
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKKRQISV RIPDLPISSN IENRDESRRD FLYYATGGVG SVTVGAALWP LINQMNPSAD  60
   61 VKALSSIRVD ISDVEPGTQL TVKWLGKPVF VRRRTKEEIR AARVTEFSEL IDKSARNDNK 120
  121 PELDAADRNR TLDTNGEWLV MMGVCTHLGC VPLGGGAGEF NGWFCPCHGS HYDTSGRIRK 180
  181 GPAPENLSVP VAVFLDKTTI RLG

Type	Start	End	Confidence
Cytoplasmic	1	30	0.82
Transmembrane Helix	31	52	0.77
Non-Cytoplasmic	53	203	0.90